Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vsx1Q91V10 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.3■□□□□ 0.84
Vsx1Q91V10 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vsx1Q91V10 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vsx1Q91V10 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vsx1Q91V10 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vsx1Q91V10 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Vsx1Q91V10 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vsx1Q91V10 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vsx1Q91V10 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vsx1Q91V10 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vsx1Q91V10 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vsx1Q91V10 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vsx1Q91V10 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vsx1Q91V10 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vsx1Q91V10 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vsx1Q91V10 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.28■□□□□ 0.84
Vsx1Q91V10 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.28■□□□□ 0.84
Vsx1Q91V10 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.28■□□□□ 0.84
Vsx1Q91V10 Gm43060-201ENSMUST00000200621 289 ntBASIC20.28■□□□□ 0.84
Vsx1Q91V10 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vsx1Q91V10 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vsx1Q91V10 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vsx1Q91V10 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vsx1Q91V10 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vsx1Q91V10 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vsx1Q91V10 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vsx1Q91V10 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.27■□□□□ 0.84
Vsx1Q91V10 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Vsx1Q91V10 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vsx1Q91V10 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vsx1Q91V10 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vsx1Q91V10 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.26■□□□□ 0.83
Vsx1Q91V10 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vsx1Q91V10 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vsx1Q91V10 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.25■□□□□ 0.83
Vsx1Q91V10 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vsx1Q91V10 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vsx1Q91V10 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Vsx1Q91V10 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vsx1Q91V10 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vsx1Q91V10 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Vsx1Q91V10 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Vsx1Q91V10 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vsx1Q91V10 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vsx1Q91V10 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vsx1Q91V10 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.24■□□□□ 0.83
Vsx1Q91V10 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vsx1Q91V10 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vsx1Q91V10 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vsx1Q91V10 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vsx1Q91V10 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vsx1Q91V10 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vsx1Q91V10 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.23■□□□□ 0.83
Vsx1Q91V10 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vsx1Q91V10 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.23■□□□□ 0.83
Vsx1Q91V10 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vsx1Q91V10 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vsx1Q91V10 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vsx1Q91V10 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Vsx1Q91V10 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vsx1Q91V10 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.21■□□□□ 0.83
Vsx1Q91V10 Gm40848-201ENSMUST00000221998 324 ntBASIC20.21■□□□□ 0.83
Vsx1Q91V10 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vsx1Q91V10 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Vsx1Q91V10 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vsx1Q91V10 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.2■□□□□ 0.82
Vsx1Q91V10 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vsx1Q91V10 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Vsx1Q91V10 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.19■□□□□ 0.82
Vsx1Q91V10 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vsx1Q91V10 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms