Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TraipQ8VIG6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TraipQ8VIG6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TraipQ8VIG6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TraipQ8VIG6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TraipQ8VIG6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TraipQ8VIG6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TraipQ8VIG6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
TraipQ8VIG6 Gm8493-201ENSMUST00000196881 489 ntBASIC21.87■■□□□ 1.09
TraipQ8VIG6 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.87■■□□□ 1.09
TraipQ8VIG6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
TraipQ8VIG6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TraipQ8VIG6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TraipQ8VIG6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TraipQ8VIG6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TraipQ8VIG6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.86■■□□□ 1.09
TraipQ8VIG6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.86■■□□□ 1.09
TraipQ8VIG6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TraipQ8VIG6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TraipQ8VIG6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TraipQ8VIG6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.85■■□□□ 1.09
TraipQ8VIG6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.85■■□□□ 1.09
TraipQ8VIG6 Gm43173-201ENSMUST00000202246 593 ntBASIC21.85■■□□□ 1.09
TraipQ8VIG6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
TraipQ8VIG6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TraipQ8VIG6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
TraipQ8VIG6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TraipQ8VIG6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TraipQ8VIG6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TraipQ8VIG6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TraipQ8VIG6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TraipQ8VIG6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TraipQ8VIG6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.83■■□□□ 1.09
TraipQ8VIG6 Spcs1-204ENSMUST00000226782 949 ntBASIC21.83■■□□□ 1.09
TraipQ8VIG6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TraipQ8VIG6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TraipQ8VIG6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TraipQ8VIG6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TraipQ8VIG6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TraipQ8VIG6 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.82■■□□□ 1.08
TraipQ8VIG6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TraipQ8VIG6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TraipQ8VIG6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.81■■□□□ 1.08
TraipQ8VIG6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.81■■□□□ 1.08
TraipQ8VIG6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TraipQ8VIG6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TraipQ8VIG6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TraipQ8VIG6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TraipQ8VIG6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TraipQ8VIG6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
TraipQ8VIG6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TraipQ8VIG6 Gm12251-201ENSMUST00000117893 792 ntBASIC21.8■■□□□ 1.08
TraipQ8VIG6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TraipQ8VIG6 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.79■■□□□ 1.08
TraipQ8VIG6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TraipQ8VIG6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TraipQ8VIG6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.79■■□□□ 1.08
TraipQ8VIG6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.79■■□□□ 1.08
TraipQ8VIG6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TraipQ8VIG6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TraipQ8VIG6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TraipQ8VIG6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TraipQ8VIG6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TraipQ8VIG6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TraipQ8VIG6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TraipQ8VIG6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TraipQ8VIG6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TraipQ8VIG6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TraipQ8VIG6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TraipQ8VIG6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TraipQ8VIG6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TraipQ8VIG6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TraipQ8VIG6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TraipQ8VIG6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
TraipQ8VIG6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TraipQ8VIG6 Gm43017-201ENSMUST00000198296 752 ntBASIC21.77■■□□□ 1.08
TraipQ8VIG6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TraipQ8VIG6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TraipQ8VIG6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TraipQ8VIG6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TraipQ8VIG6 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.76■■□□□ 1.07
TraipQ8VIG6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TraipQ8VIG6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TraipQ8VIG6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TraipQ8VIG6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TraipQ8VIG6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TraipQ8VIG6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TraipQ8VIG6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TraipQ8VIG6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms