Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cspg4Q8VHY0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg4Q8VHY0 Gm10653-202ENSMUST00000139570 835 ntBASIC17.75■□□□□ 0.43
Cspg4Q8VHY0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.75■□□□□ 0.43
Cspg4Q8VHY0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cspg4Q8VHY0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cspg4Q8VHY0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg4Q8VHY0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg4Q8VHY0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg4Q8VHY0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cspg4Q8VHY0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cspg4Q8VHY0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cspg4Q8VHY0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg4Q8VHY0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg4Q8VHY0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.71■□□□□ 0.43
Cspg4Q8VHY0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg4Q8VHY0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg4Q8VHY0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg4Q8VHY0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.71■□□□□ 0.43
Cspg4Q8VHY0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg4Q8VHY0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cspg4Q8VHY0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.71■□□□□ 0.42
Cspg4Q8VHY0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cspg4Q8VHY0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cspg4Q8VHY0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg4Q8VHY0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.68■□□□□ 0.42
Cspg4Q8VHY0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg4Q8VHY0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg4Q8VHY0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg4Q8VHY0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg4Q8VHY0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cspg4Q8VHY0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.66■□□□□ 0.42
Cspg4Q8VHY0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg4Q8VHY0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg4Q8VHY0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg4Q8VHY0 Gm12441-201ENSMUST00000121806 588 ntBASIC17.66■□□□□ 0.42
Cspg4Q8VHY0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cspg4Q8VHY0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms