Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpa1Q8VEE4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Gm16437-201ENSMUST00000025669 507 ntBASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa1Q8VEE4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Scarna2-201ENSMUST00000157560 414 ntBASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa1Q8VEE4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpa1Q8VEE4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpa1Q8VEE4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpa1Q8VEE4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpa1Q8VEE4 Gm9806-201ENSMUST00000051080 552 ntBASIC20.47■□□□□ 0.87
Rpa1Q8VEE4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpa1Q8VEE4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa1Q8VEE4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.45■□□□□ 0.86
Rpa1Q8VEE4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpa1Q8VEE4 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.45■□□□□ 0.86
Rpa1Q8VEE4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpa1Q8VEE4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpa1Q8VEE4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpa1Q8VEE4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpa1Q8VEE4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa1Q8VEE4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpa1Q8VEE4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rpa1Q8VEE4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpa1Q8VEE4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpa1Q8VEE4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpa1Q8VEE4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpa1Q8VEE4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpa1Q8VEE4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa1Q8VEE4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms