Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.01■□□□□ 0.95
Rprd1aQ8VDS4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rprd1aQ8VDS4 Notumos-201ENSMUST00000151998 2659 ntBASIC21■□□□□ 0.95
Rprd1aQ8VDS4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rprd1aQ8VDS4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rprd1aQ8VDS4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21■□□□□ 0.95
Rprd1aQ8VDS4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
Rprd1aQ8VDS4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rprd1aQ8VDS4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Gm13241-201ENSMUST00000094493 780 ntBASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rprd1aQ8VDS4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Golgb1-201ENSMUST00000023534 498 ntBASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rprd1aQ8VDS4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rprd1aQ8VDS4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rprd1aQ8VDS4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rprd1aQ8VDS4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rprd1aQ8VDS4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.97■□□□□ 0.95
Rprd1aQ8VDS4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rprd1aQ8VDS4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rprd1aQ8VDS4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rprd1aQ8VDS4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Rprd1aQ8VDS4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rprd1aQ8VDS4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rprd1aQ8VDS4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rprd1aQ8VDS4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rprd1aQ8VDS4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rprd1aQ8VDS4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.93■□□□□ 0.94
Rprd1aQ8VDS4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rprd1aQ8VDS4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rprd1aQ8VDS4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rprd1aQ8VDS4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rprd1aQ8VDS4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rprd1aQ8VDS4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rprd1aQ8VDS4 Gm21956-201ENSMUST00000179946 522 ntBASIC20.91■□□□□ 0.94
Rprd1aQ8VDS4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rprd1aQ8VDS4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms