Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdt1Q8R4E9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cdt1Q8R4E9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdt1Q8R4E9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cdt1Q8R4E9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdt1Q8R4E9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdt1Q8R4E9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdt1Q8R4E9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.68■□□□□ 0.74
Cdt1Q8R4E9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cdt1Q8R4E9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cdt1Q8R4E9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdt1Q8R4E9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Gm8495-201ENSMUST00000188740 694 ntBASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdt1Q8R4E9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.64■□□□□ 0.73
Cdt1Q8R4E9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.64■□□□□ 0.73
Cdt1Q8R4E9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.64■□□□□ 0.73
Cdt1Q8R4E9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cdt1Q8R4E9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.64■□□□□ 0.73
Cdt1Q8R4E9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdt1Q8R4E9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Cdt1Q8R4E9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdt1Q8R4E9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdt1Q8R4E9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms