Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slf1Q8R3P9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.53■□□□□ 0.88
Slf1Q8R3P9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf1Q8R3P9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slf1Q8R3P9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf1Q8R3P9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf1Q8R3P9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf1Q8R3P9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Slf1Q8R3P9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slf1Q8R3P9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.51■□□□□ 0.87
Slf1Q8R3P9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slf1Q8R3P9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Slf1Q8R3P9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slf1Q8R3P9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.51■□□□□ 0.87
Slf1Q8R3P9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slf1Q8R3P9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Slf1Q8R3P9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf1Q8R3P9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf1Q8R3P9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.5■□□□□ 0.87
Slf1Q8R3P9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf1Q8R3P9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Slf1Q8R3P9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slf1Q8R3P9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf1Q8R3P9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.48■□□□□ 0.87
Slf1Q8R3P9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf1Q8R3P9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf1Q8R3P9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf1Q8R3P9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slf1Q8R3P9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slf1Q8R3P9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slf1Q8R3P9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Slf1Q8R3P9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slf1Q8R3P9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slf1Q8R3P9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms