Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zcchc9Q8R1J3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zcchc9Q8R1J3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zcchc9Q8R1J3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zcchc9Q8R1J3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Gm8495-201ENSMUST00000188740 694 ntBASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Zcchc9Q8R1J3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Zcchc9Q8R1J3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Zcchc9Q8R1J3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Zcchc9Q8R1J3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Zcchc9Q8R1J3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Zcchc9Q8R1J3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Zcchc9Q8R1J3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zcchc9Q8R1J3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zcchc9Q8R1J3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zcchc9Q8R1J3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Zcchc9Q8R1J3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Zcchc9Q8R1J3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zcchc9Q8R1J3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zcchc9Q8R1J3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Zcchc9Q8R1J3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zcchc9Q8R1J3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zcchc9Q8R1J3 Gm18284-201ENSMUST00000172604 624 ntBASIC20.31■□□□□ 0.84
Zcchc9Q8R1J3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zcchc9Q8R1J3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zcchc9Q8R1J3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zcchc9Q8R1J3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Zcchc9Q8R1J3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zcchc9Q8R1J3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zcchc9Q8R1J3 Mir7075-201ENSMUST00000184187 82 ntBASIC20.3■□□□□ 0.84
Zcchc9Q8R1J3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zcchc9Q8R1J3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zcchc9Q8R1J3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zcchc9Q8R1J3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Zcchc9Q8R1J3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Zcchc9Q8R1J3 Gm43017-201ENSMUST00000198296 752 ntBASIC20.29■□□□□ 0.84
Zcchc9Q8R1J3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zcchc9Q8R1J3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zcchc9Q8R1J3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.29■□□□□ 0.84
Zcchc9Q8R1J3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zcchc9Q8R1J3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zcchc9Q8R1J3 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.27■□□□□ 0.84
Zcchc9Q8R1J3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zcchc9Q8R1J3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Zcchc9Q8R1J3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Zcchc9Q8R1J3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.27■□□□□ 0.84
Zcchc9Q8R1J3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Zcchc9Q8R1J3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Zcchc9Q8R1J3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Zcchc9Q8R1J3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zcchc9Q8R1J3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Zcchc9Q8R1J3 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.25■□□□□ 0.83
Zcchc9Q8R1J3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.25■□□□□ 0.83
Zcchc9Q8R1J3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zcchc9Q8R1J3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zcchc9Q8R1J3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Zcchc9Q8R1J3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.25■□□□□ 0.83
Zcchc9Q8R1J3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zcchc9Q8R1J3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms