Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22■■□□□ 1.11
Rpp40Q8R1F9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rpp40Q8R1F9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rpp40Q8R1F9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rpp40Q8R1F9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rpp40Q8R1F9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rpp40Q8R1F9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rpp40Q8R1F9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpp40Q8R1F9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rpp40Q8R1F9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpp40Q8R1F9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpp40Q8R1F9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpp40Q8R1F9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.98■■□□□ 1.11
Rpp40Q8R1F9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rpp40Q8R1F9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpp40Q8R1F9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpp40Q8R1F9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
Rpp40Q8R1F9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rpp40Q8R1F9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rpp40Q8R1F9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rpp40Q8R1F9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.95■■□□□ 1.1
Rpp40Q8R1F9 Gm43530-201ENSMUST00000195920 274 ntBASIC21.95■■□□□ 1.1
Rpp40Q8R1F9 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.95■■□□□ 1.1
Rpp40Q8R1F9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rpp40Q8R1F9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rpp40Q8R1F9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rpp40Q8R1F9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rpp40Q8R1F9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rpp40Q8R1F9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.94■■□□□ 1.1
Rpp40Q8R1F9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rpp40Q8R1F9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Rpp40Q8R1F9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rpp40Q8R1F9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Rpp40Q8R1F9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rpp40Q8R1F9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rpp40Q8R1F9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rpp40Q8R1F9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp40Q8R1F9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp40Q8R1F9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp40Q8R1F9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp40Q8R1F9 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.91■■□□□ 1.1
Rpp40Q8R1F9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp40Q8R1F9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp40Q8R1F9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp40Q8R1F9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp40Q8R1F9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp40Q8R1F9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
Rpp40Q8R1F9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpp40Q8R1F9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
Rpp40Q8R1F9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rpp40Q8R1F9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Rpp40Q8R1F9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpp40Q8R1F9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpp40Q8R1F9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rpp40Q8R1F9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rpp40Q8R1F9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.89■■□□□ 1.09
Rpp40Q8R1F9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpp40Q8R1F9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Rpp40Q8R1F9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpp40Q8R1F9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.89■■□□□ 1.09
Rpp40Q8R1F9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpp40Q8R1F9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpp40Q8R1F9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpp40Q8R1F9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpp40Q8R1F9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpp40Q8R1F9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpp40Q8R1F9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms