Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Gm9988-201ENSMUST00000069786 435 ntBASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx54Q8K4L0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ddx54Q8K4L0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx54Q8K4L0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC27.2■■□□□ 1.94
Ddx54Q8K4L0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx54Q8K4L0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx54Q8K4L0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Ddx54Q8K4L0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC27.2■■□□□ 1.94
Ddx54Q8K4L0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ddx54Q8K4L0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ddx54Q8K4L0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ddx54Q8K4L0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx54Q8K4L0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Ddx54Q8K4L0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx54Q8K4L0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
Ddx54Q8K4L0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx54Q8K4L0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx54Q8K4L0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx54Q8K4L0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx54Q8K4L0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx54Q8K4L0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
Ddx54Q8K4L0 Gm11421-201ENSMUST00000122124 294 ntBASIC27.17■■□□□ 1.94
Ddx54Q8K4L0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx54Q8K4L0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx54Q8K4L0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx54Q8K4L0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx54Q8K4L0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx54Q8K4L0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx54Q8K4L0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Ddx54Q8K4L0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx54Q8K4L0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC27.16■■□□□ 1.94
Ddx54Q8K4L0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Ddx54Q8K4L0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.15■■□□□ 1.94
Ddx54Q8K4L0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx54Q8K4L0 Gm12441-201ENSMUST00000121806 588 ntBASIC27.15■■□□□ 1.94
Ddx54Q8K4L0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
Ddx54Q8K4L0 Gm10252-201ENSMUST00000209541 832 ntBASIC27.15■■□□□ 1.94
Ddx54Q8K4L0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx54Q8K4L0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx54Q8K4L0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx54Q8K4L0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ddx54Q8K4L0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ddx54Q8K4L0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ddx54Q8K4L0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ddx54Q8K4L0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Ddx54Q8K4L0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
Ddx54Q8K4L0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx54Q8K4L0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx54Q8K4L0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Ddx54Q8K4L0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC27.13■■□□□ 1.93
Ddx54Q8K4L0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx54Q8K4L0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Ddx54Q8K4L0 Gm22325-201ENSMUST00000158904 308 ntBASIC27.12■■□□□ 1.93
Ddx54Q8K4L0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC27.12■■□□□ 1.93
Ddx54Q8K4L0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC27.12■■□□□ 1.93
Ddx54Q8K4L0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC27.12■■□□□ 1.93
Ddx54Q8K4L0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx54Q8K4L0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC27.12■■□□□ 1.93
Ddx54Q8K4L0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx54Q8K4L0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Ddx54Q8K4L0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Ddx54Q8K4L0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx54Q8K4L0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx54Q8K4L0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx54Q8K4L0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx54Q8K4L0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx54Q8K4L0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx54Q8K4L0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
Ddx54Q8K4L0 Gm22240-201ENSMUST00000175225 82 ntBASIC27.09■■□□□ 1.93
Ddx54Q8K4L0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC27.09■■□□□ 1.93
Ddx54Q8K4L0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx54Q8K4L0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx54Q8K4L0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC27.08■■□□□ 1.93
Ddx54Q8K4L0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx54Q8K4L0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC27.08■■□□□ 1.93
Ddx54Q8K4L0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC27.08■■□□□ 1.93
Ddx54Q8K4L0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx54Q8K4L0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Ddx54Q8K4L0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC27.07■■□□□ 1.92
Ddx54Q8K4L0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC27.06■■□□□ 1.92
Ddx54Q8K4L0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC27.06■■□□□ 1.92
Ddx54Q8K4L0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms