Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC12.74□□□□□ -0.37
Cystm1Q8K353 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cystm1Q8K353 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.74□□□□□ -0.37
Cystm1Q8K353 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.74□□□□□ -0.37
Cystm1Q8K353 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cystm1Q8K353 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cystm1Q8K353 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cystm1Q8K353 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Gm44428-201ENSMUST00000204474 874 ntBASIC12.72□□□□□ -0.37
Cystm1Q8K353 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cystm1Q8K353 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cystm1Q8K353 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cystm1Q8K353 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cystm1Q8K353 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cystm1Q8K353 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cystm1Q8K353 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cystm1Q8K353 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cystm1Q8K353 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cystm1Q8K353 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Cystm1Q8K353 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cystm1Q8K353 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.71□□□□□ -0.37
Cystm1Q8K353 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cystm1Q8K353 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Cystm1Q8K353 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cystm1Q8K353 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cystm1Q8K353 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Cystm1Q8K353 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cystm1Q8K353 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cystm1Q8K353 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Gm28731-201ENSMUST00000185564 1569 ntBASIC12.7□□□□□ -0.38
Cystm1Q8K353 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cystm1Q8K353 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Gm27502-201ENSMUST00000183495 199 ntBASIC12.69□□□□□ -0.38
Cystm1Q8K353 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cystm1Q8K353 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cystm1Q8K353 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cystm1Q8K353 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms