Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.2■■□□□ 1.46
Cchcr1Q8K2I2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cchcr1Q8K2I2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cchcr1Q8K2I2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Cchcr1Q8K2I2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.18■■□□□ 1.46
Cchcr1Q8K2I2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.18■■□□□ 1.46
Cchcr1Q8K2I2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Cchcr1Q8K2I2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cchcr1Q8K2I2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cchcr1Q8K2I2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cchcr1Q8K2I2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cchcr1Q8K2I2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cchcr1Q8K2I2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cchcr1Q8K2I2 Gm10232-201ENSMUST00000089221 720 ntBASIC24.17■■□□□ 1.46
Cchcr1Q8K2I2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cchcr1Q8K2I2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cchcr1Q8K2I2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cchcr1Q8K2I2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Cchcr1Q8K2I2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cchcr1Q8K2I2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cchcr1Q8K2I2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cchcr1Q8K2I2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cchcr1Q8K2I2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cchcr1Q8K2I2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
Cchcr1Q8K2I2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cchcr1Q8K2I2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cchcr1Q8K2I2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cchcr1Q8K2I2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Cchcr1Q8K2I2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cchcr1Q8K2I2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cchcr1Q8K2I2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC24.15■■□□□ 1.46
Cchcr1Q8K2I2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Cchcr1Q8K2I2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Cchcr1Q8K2I2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Cchcr1Q8K2I2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.14■■□□□ 1.45
Cchcr1Q8K2I2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cchcr1Q8K2I2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cchcr1Q8K2I2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cchcr1Q8K2I2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Cchcr1Q8K2I2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Cchcr1Q8K2I2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Cchcr1Q8K2I2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cchcr1Q8K2I2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cchcr1Q8K2I2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cchcr1Q8K2I2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cchcr1Q8K2I2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
Cchcr1Q8K2I2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Cchcr1Q8K2I2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cchcr1Q8K2I2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cchcr1Q8K2I2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cchcr1Q8K2I2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Cchcr1Q8K2I2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cchcr1Q8K2I2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.11■■□□□ 1.45
Cchcr1Q8K2I2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cchcr1Q8K2I2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cchcr1Q8K2I2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cchcr1Q8K2I2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cchcr1Q8K2I2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Cchcr1Q8K2I2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24.09■■□□□ 1.45
Cchcr1Q8K2I2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cchcr1Q8K2I2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cchcr1Q8K2I2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cchcr1Q8K2I2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cchcr1Q8K2I2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cchcr1Q8K2I2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Cchcr1Q8K2I2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Cchcr1Q8K2I2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.07■■□□□ 1.44
Cchcr1Q8K2I2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms