Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rtn1Q8K0T0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rtn1Q8K0T0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.62■■□□□ 1.37
Rtn1Q8K0T0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Rtn1Q8K0T0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rtn1Q8K0T0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rtn1Q8K0T0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
Rtn1Q8K0T0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rtn1Q8K0T0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rtn1Q8K0T0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rtn1Q8K0T0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Rtn1Q8K0T0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rtn1Q8K0T0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rtn1Q8K0T0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.6■■□□□ 1.37
Rtn1Q8K0T0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.6■■□□□ 1.37
Rtn1Q8K0T0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Rtn1Q8K0T0 Gm9870-201ENSMUST00000063874 645 ntBASIC23.6■■□□□ 1.37
Rtn1Q8K0T0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rtn1Q8K0T0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rtn1Q8K0T0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rtn1Q8K0T0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Rtn1Q8K0T0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rtn1Q8K0T0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rtn1Q8K0T0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rtn1Q8K0T0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rtn1Q8K0T0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Rtn1Q8K0T0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rtn1Q8K0T0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rtn1Q8K0T0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rtn1Q8K0T0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rtn1Q8K0T0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rtn1Q8K0T0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rtn1Q8K0T0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rtn1Q8K0T0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rtn1Q8K0T0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.57■■□□□ 1.36
Rtn1Q8K0T0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.57■■□□□ 1.36
Rtn1Q8K0T0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.57■■□□□ 1.36
Rtn1Q8K0T0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
Rtn1Q8K0T0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.57■■□□□ 1.36
Rtn1Q8K0T0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Rtn1Q8K0T0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rtn1Q8K0T0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rtn1Q8K0T0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn1Q8K0T0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rtn1Q8K0T0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.55■■□□□ 1.36
Rtn1Q8K0T0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rtn1Q8K0T0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rtn1Q8K0T0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Rtn1Q8K0T0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rtn1Q8K0T0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rtn1Q8K0T0 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.55■■□□□ 1.36
Rtn1Q8K0T0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Rtn1Q8K0T0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Rtn1Q8K0T0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Rtn1Q8K0T0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rtn1Q8K0T0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rtn1Q8K0T0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rtn1Q8K0T0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Rtn1Q8K0T0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rtn1Q8K0T0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rtn1Q8K0T0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.53■■□□□ 1.36
Rtn1Q8K0T0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.53■■□□□ 1.36
Rtn1Q8K0T0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rtn1Q8K0T0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rtn1Q8K0T0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
Rtn1Q8K0T0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rtn1Q8K0T0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Rtn1Q8K0T0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rtn1Q8K0T0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.52■■□□□ 1.36
Rtn1Q8K0T0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Rtn1Q8K0T0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rtn1Q8K0T0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Rtn1Q8K0T0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rtn1Q8K0T0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rtn1Q8K0T0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rtn1Q8K0T0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rtn1Q8K0T0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rtn1Q8K0T0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.51■■□□□ 1.35
Rtn1Q8K0T0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rtn1Q8K0T0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Rtn1Q8K0T0 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.5■■□□□ 1.35
Rtn1Q8K0T0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rtn1Q8K0T0 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.5■■□□□ 1.35
Rtn1Q8K0T0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rtn1Q8K0T0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.5■■□□□ 1.35
Rtn1Q8K0T0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn1Q8K0T0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
Rtn1Q8K0T0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn1Q8K0T0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn1Q8K0T0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms