Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim5Q8CI51 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pdlim5Q8CI51 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.83■□□□□ 0.6
Pdlim5Q8CI51 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim5Q8CI51 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.81■□□□□ 0.6
Pdlim5Q8CI51 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim5Q8CI51 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim5Q8CI51 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim5Q8CI51 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim5Q8CI51 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim5Q8CI51 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
Pdlim5Q8CI51 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim5Q8CI51 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim5Q8CI51 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim5Q8CI51 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Pdlim5Q8CI51 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim5Q8CI51 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim5Q8CI51 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.77■□□□□ 0.6
Pdlim5Q8CI51 Gm10399-202ENSMUST00000202768 748 ntBASIC18.77■□□□□ 0.6
Pdlim5Q8CI51 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim5Q8CI51 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim5Q8CI51 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim5Q8CI51 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim5Q8CI51 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pdlim5Q8CI51 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim5Q8CI51 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.76■□□□□ 0.59
Pdlim5Q8CI51 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.76■□□□□ 0.59
Pdlim5Q8CI51 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim5Q8CI51 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.76■□□□□ 0.59
Pdlim5Q8CI51 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.75■□□□□ 0.59
Pdlim5Q8CI51 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pdlim5Q8CI51 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim5Q8CI51 Gm10232-201ENSMUST00000089221 720 ntBASIC18.75■□□□□ 0.59
Pdlim5Q8CI51 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim5Q8CI51 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim5Q8CI51 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pdlim5Q8CI51 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pdlim5Q8CI51 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pdlim5Q8CI51 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim5Q8CI51 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pdlim5Q8CI51 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim5Q8CI51 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim5Q8CI51 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim5Q8CI51 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.74■□□□□ 0.59
Pdlim5Q8CI51 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim5Q8CI51 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim5Q8CI51 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim5Q8CI51 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.73■□□□□ 0.59
Pdlim5Q8CI51 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Pdlim5Q8CI51 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim5Q8CI51 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Pdlim5Q8CI51 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim5Q8CI51 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pdlim5Q8CI51 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pdlim5Q8CI51 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms