Protein–RNA interactions for Protein: Q8CHZ9

Mterf1a, Transcription termination factor 1a, mitochondrial, mousemouse

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mterf1aQ8CHZ9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mterf1aQ8CHZ9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mterf1aQ8CHZ9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mterf1aQ8CHZ9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.46■□□□□ 0.71
Mterf1aQ8CHZ9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mterf1aQ8CHZ9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.46■□□□□ 0.71
Mterf1aQ8CHZ9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Mterf1aQ8CHZ9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.45■□□□□ 0.7
Mterf1aQ8CHZ9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.45■□□□□ 0.7
Mterf1aQ8CHZ9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.45■□□□□ 0.7
Mterf1aQ8CHZ9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mterf1aQ8CHZ9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mterf1aQ8CHZ9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mterf1aQ8CHZ9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.42■□□□□ 0.7
Mterf1aQ8CHZ9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mterf1aQ8CHZ9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mterf1aQ8CHZ9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.39■□□□□ 0.7
Mterf1aQ8CHZ9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Mterf1aQ8CHZ9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mterf1aQ8CHZ9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mterf1aQ8CHZ9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mterf1aQ8CHZ9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mterf1aQ8CHZ9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mterf1aQ8CHZ9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mterf1aQ8CHZ9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mterf1aQ8CHZ9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mterf1aQ8CHZ9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mterf1aQ8CHZ9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.38■□□□□ 0.69
Mterf1aQ8CHZ9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Mterf1aQ8CHZ9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mterf1aQ8CHZ9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.38■□□□□ 0.69
Mterf1aQ8CHZ9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mterf1aQ8CHZ9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mterf1aQ8CHZ9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms