Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Gm11687-201ENSMUST00000118911 886 ntBASIC17.33■□□□□ 0.36
Mmp28Q8CGV8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp28Q8CGV8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Gm16437-201ENSMUST00000025669 507 ntBASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp28Q8CGV8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Mmp28Q8CGV8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp28Q8CGV8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp28Q8CGV8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Mmp28Q8CGV8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Mmp28Q8CGV8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp28Q8CGV8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.27■□□□□ 0.35
Mmp28Q8CGV8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp28Q8CGV8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp28Q8CGV8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp28Q8CGV8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp28Q8CGV8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp28Q8CGV8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp28Q8CGV8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp28Q8CGV8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp28Q8CGV8 Gm44428-201ENSMUST00000204474 874 ntBASIC17.26■□□□□ 0.35
Mmp28Q8CGV8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp28Q8CGV8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp28Q8CGV8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp28Q8CGV8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp28Q8CGV8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mmp28Q8CGV8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp28Q8CGV8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp28Q8CGV8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp28Q8CGV8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Mmp28Q8CGV8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp28Q8CGV8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp28Q8CGV8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp28Q8CGV8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp28Q8CGV8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms