Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rp1l1Q8CGM2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rp1l1Q8CGM2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.78■■□□□ 1.08
Rp1l1Q8CGM2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rp1l1Q8CGM2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.77■■□□□ 1.08
Rp1l1Q8CGM2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rp1l1Q8CGM2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Rp1l1Q8CGM2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rp1l1Q8CGM2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.77■■□□□ 1.08
Rp1l1Q8CGM2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.77■■□□□ 1.08
Rp1l1Q8CGM2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rp1l1Q8CGM2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rp1l1Q8CGM2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rp1l1Q8CGM2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rp1l1Q8CGM2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rp1l1Q8CGM2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Rp1l1Q8CGM2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.75■■□□□ 1.07
Rp1l1Q8CGM2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Rp1l1Q8CGM2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rp1l1Q8CGM2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rp1l1Q8CGM2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.75■■□□□ 1.07
Rp1l1Q8CGM2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rp1l1Q8CGM2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rp1l1Q8CGM2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Rp1l1Q8CGM2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rp1l1Q8CGM2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.74■■□□□ 1.07
Rp1l1Q8CGM2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rp1l1Q8CGM2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rp1l1Q8CGM2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rp1l1Q8CGM2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rp1l1Q8CGM2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rp1l1Q8CGM2 Gm12933-201ENSMUST00000120203 872 ntBASIC21.73■■□□□ 1.07
Rp1l1Q8CGM2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.73■■□□□ 1.07
Rp1l1Q8CGM2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rp1l1Q8CGM2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rp1l1Q8CGM2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rp1l1Q8CGM2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.73■■□□□ 1.07
Rp1l1Q8CGM2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rp1l1Q8CGM2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.73■■□□□ 1.07
Rp1l1Q8CGM2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rp1l1Q8CGM2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rp1l1Q8CGM2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rp1l1Q8CGM2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rp1l1Q8CGM2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rp1l1Q8CGM2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rp1l1Q8CGM2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rp1l1Q8CGM2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 Gm11421-201ENSMUST00000122124 294 ntBASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rp1l1Q8CGM2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rp1l1Q8CGM2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rp1l1Q8CGM2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rp1l1Q8CGM2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rp1l1Q8CGM2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rp1l1Q8CGM2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rp1l1Q8CGM2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rp1l1Q8CGM2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rp1l1Q8CGM2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rp1l1Q8CGM2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rp1l1Q8CGM2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rp1l1Q8CGM2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rp1l1Q8CGM2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Rp1l1Q8CGM2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rp1l1Q8CGM2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.68■■□□□ 1.06
Rp1l1Q8CGM2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rp1l1Q8CGM2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rp1l1Q8CGM2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rp1l1Q8CGM2 Nespas-201ENSMUST00000143738 1083 ntBASIC21.67■■□□□ 1.06
Rp1l1Q8CGM2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rp1l1Q8CGM2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rp1l1Q8CGM2 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.67■■□□□ 1.06
Rp1l1Q8CGM2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 Gm42778-201ENSMUST00000199644 553 ntBASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rp1l1Q8CGM2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rp1l1Q8CGM2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rp1l1Q8CGM2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms