Protein–RNA interactions for Protein: Q8CE96

Trmt6, tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt6Q8CE96 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trmt6Q8CE96 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trmt6Q8CE96 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trmt6Q8CE96 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trmt6Q8CE96 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trmt6Q8CE96 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trmt6Q8CE96 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trmt6Q8CE96 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.23■□□□□ 0.51
Trmt6Q8CE96 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trmt6Q8CE96 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trmt6Q8CE96 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trmt6Q8CE96 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Gm10420-201ENSMUST00000121713 882 ntBASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trmt6Q8CE96 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trmt6Q8CE96 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trmt6Q8CE96 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trmt6Q8CE96 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trmt6Q8CE96 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trmt6Q8CE96 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trmt6Q8CE96 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.2■□□□□ 0.5
Trmt6Q8CE96 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.2■□□□□ 0.5
Trmt6Q8CE96 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trmt6Q8CE96 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trmt6Q8CE96 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trmt6Q8CE96 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trmt6Q8CE96 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.19■□□□□ 0.5
Trmt6Q8CE96 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trmt6Q8CE96 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trmt6Q8CE96 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Trmt6Q8CE96 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trmt6Q8CE96 Golph3-202ENSMUST00000226517 2359 ntBASIC18.17■□□□□ 0.5
Trmt6Q8CE96 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trmt6Q8CE96 Cap2-205ENSMUST00000225824 1634 ntBASIC18.17■□□□□ 0.5
Trmt6Q8CE96 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trmt6Q8CE96 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trmt6Q8CE96 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.16■□□□□ 0.5
Trmt6Q8CE96 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trmt6Q8CE96 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trmt6Q8CE96 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms