Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a6Q8C6K9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a6Q8C6K9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col6a6Q8C6K9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.55■□□□□ 0.56
Col6a6Q8C6K9 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.55■□□□□ 0.56
Col6a6Q8C6K9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col6a6Q8C6K9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col6a6Q8C6K9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col6a6Q8C6K9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col6a6Q8C6K9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a6Q8C6K9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col6a6Q8C6K9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.52■□□□□ 0.56
Col6a6Q8C6K9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.52■□□□□ 0.56
Col6a6Q8C6K9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col6a6Q8C6K9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col6a6Q8C6K9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Col6a6Q8C6K9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col6a6Q8C6K9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.52■□□□□ 0.55
Col6a6Q8C6K9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.52■□□□□ 0.55
Col6a6Q8C6K9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col6a6Q8C6K9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a6Q8C6K9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a6Q8C6K9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a6Q8C6K9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Col6a6Q8C6K9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.5■□□□□ 0.55
Col6a6Q8C6K9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a6Q8C6K9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col6a6Q8C6K9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col6a6Q8C6K9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col6a6Q8C6K9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col6a6Q8C6K9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col6a6Q8C6K9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col6a6Q8C6K9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col6a6Q8C6K9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.48■□□□□ 0.55
Col6a6Q8C6K9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.47■□□□□ 0.55
Col6a6Q8C6K9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.46■□□□□ 0.55
Col6a6Q8C6K9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col6a6Q8C6K9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col6a6Q8C6K9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col6a6Q8C6K9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Col6a6Q8C6K9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a6Q8C6K9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.44■□□□□ 0.54
Col6a6Q8C6K9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms