Protein–RNA interactions for Protein: Q8C2S7

Amigo3, Amphoterin-induced protein 3, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Amigo3Q8C2S7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC28.16■■■□□ 2.1
Amigo3Q8C2S7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Amigo3Q8C2S7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Amigo3Q8C2S7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC28.16■■■□□ 2.1
Amigo3Q8C2S7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Amigo3Q8C2S7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Amigo3Q8C2S7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC28.15■■■□□ 2.1
Amigo3Q8C2S7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Amigo3Q8C2S7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Amigo3Q8C2S7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Amigo3Q8C2S7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Amigo3Q8C2S7 Gm7977-201ENSMUST00000193787 748 ntBASIC28.14■■■□□ 2.1
Amigo3Q8C2S7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC28.14■■■□□ 2.1
Amigo3Q8C2S7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Amigo3Q8C2S7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Amigo3Q8C2S7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC28.14■■■□□ 2.1
Amigo3Q8C2S7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Amigo3Q8C2S7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Amigo3Q8C2S7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Amigo3Q8C2S7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Amigo3Q8C2S7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Amigo3Q8C2S7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Amigo3Q8C2S7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC28.13■■■□□ 2.09
Amigo3Q8C2S7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Amigo3Q8C2S7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Amigo3Q8C2S7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
Amigo3Q8C2S7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC28.12■■■□□ 2.09
Amigo3Q8C2S7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Amigo3Q8C2S7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
Amigo3Q8C2S7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
Amigo3Q8C2S7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC28.12■■■□□ 2.09
Amigo3Q8C2S7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Amigo3Q8C2S7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Amigo3Q8C2S7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Amigo3Q8C2S7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Amigo3Q8C2S7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
Amigo3Q8C2S7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Amigo3Q8C2S7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC28.11■■■□□ 2.09
Amigo3Q8C2S7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Amigo3Q8C2S7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Amigo3Q8C2S7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Gm20760-201ENSMUST00000179197 648 ntBASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Amigo3Q8C2S7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
Amigo3Q8C2S7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Amigo3Q8C2S7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
Amigo3Q8C2S7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Amigo3Q8C2S7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Amigo3Q8C2S7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Amigo3Q8C2S7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Amigo3Q8C2S7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Amigo3Q8C2S7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Amigo3Q8C2S7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Amigo3Q8C2S7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC28.08■■■□□ 2.09
Amigo3Q8C2S7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Amigo3Q8C2S7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Amigo3Q8C2S7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC28.08■■■□□ 2.09
Amigo3Q8C2S7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
Amigo3Q8C2S7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Amigo3Q8C2S7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Amigo3Q8C2S7 Gm9988-201ENSMUST00000069786 435 ntBASIC28.07■■■□□ 2.08
Amigo3Q8C2S7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Amigo3Q8C2S7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Amigo3Q8C2S7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Amigo3Q8C2S7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Amigo3Q8C2S7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Amigo3Q8C2S7 Gm13234-201ENSMUST00000120010 747 ntBASIC28.06■■■□□ 2.08
Amigo3Q8C2S7 Gm11421-201ENSMUST00000122124 294 ntBASIC28.06■■■□□ 2.08
Amigo3Q8C2S7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC28.06■■■□□ 2.08
Amigo3Q8C2S7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Amigo3Q8C2S7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Amigo3Q8C2S7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC28.05■■■□□ 2.08
Amigo3Q8C2S7 AC135963.1-201ENSMUST00000211640 717 ntBASIC28.05■■■□□ 2.08
Amigo3Q8C2S7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Amigo3Q8C2S7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
Amigo3Q8C2S7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Amigo3Q8C2S7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Amigo3Q8C2S7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Amigo3Q8C2S7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Amigo3Q8C2S7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Amigo3Q8C2S7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Amigo3Q8C2S7 Reep4-203ENSMUST00000226563 1444 ntBASIC28.03■■■□□ 2.08
Amigo3Q8C2S7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC28.03■■■□□ 2.08
Amigo3Q8C2S7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Amigo3Q8C2S7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Amigo3Q8C2S7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC28.03■■■□□ 2.08
Amigo3Q8C2S7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Amigo3Q8C2S7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Amigo3Q8C2S7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Amigo3Q8C2S7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms