Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps9d1Q8C190 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vps9d1Q8C190 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps9d1Q8C190 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Vps9d1Q8C190 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps9d1Q8C190 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps9d1Q8C190 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps9d1Q8C190 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vps9d1Q8C190 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19■□□□□ 0.63
Vps9d1Q8C190 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Vps9d1Q8C190 Gm34220-201ENSMUST00000223001 2709 ntBASIC19■□□□□ 0.63
Vps9d1Q8C190 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps9d1Q8C190 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps9d1Q8C190 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps9d1Q8C190 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps9d1Q8C190 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps9d1Q8C190 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps9d1Q8C190 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps9d1Q8C190 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms