Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ppp4r4Q8C0Y0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.53■□□□□ 0.88
Ppp4r4Q8C0Y0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.53■□□□□ 0.88
Ppp4r4Q8C0Y0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ppp4r4Q8C0Y0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ppp4r4Q8C0Y0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ppp4r4Q8C0Y0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ppp4r4Q8C0Y0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
Ppp4r4Q8C0Y0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.52■□□□□ 0.88
Ppp4r4Q8C0Y0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ppp4r4Q8C0Y0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ppp4r4Q8C0Y0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ppp4r4Q8C0Y0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ppp4r4Q8C0Y0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ppp4r4Q8C0Y0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ppp4r4Q8C0Y0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ppp4r4Q8C0Y0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.5■□□□□ 0.87
Ppp4r4Q8C0Y0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.5■□□□□ 0.87
Ppp4r4Q8C0Y0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ppp4r4Q8C0Y0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ppp4r4Q8C0Y0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ppp4r4Q8C0Y0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ppp4r4Q8C0Y0 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ppp4r4Q8C0Y0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ppp4r4Q8C0Y0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ppp4r4Q8C0Y0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ppp4r4Q8C0Y0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ppp4r4Q8C0Y0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.48■□□□□ 0.87
Ppp4r4Q8C0Y0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ppp4r4Q8C0Y0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ppp4r4Q8C0Y0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ppp4r4Q8C0Y0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ppp4r4Q8C0Y0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ppp4r4Q8C0Y0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ppp4r4Q8C0Y0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ppp4r4Q8C0Y0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.47■□□□□ 0.87
Ppp4r4Q8C0Y0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Ppp4r4Q8C0Y0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.47■□□□□ 0.87
Ppp4r4Q8C0Y0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ppp4r4Q8C0Y0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ppp4r4Q8C0Y0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp4r4Q8C0Y0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp4r4Q8C0Y0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.46■□□□□ 0.87
Ppp4r4Q8C0Y0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ppp4r4Q8C0Y0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp4r4Q8C0Y0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.46■□□□□ 0.87
Ppp4r4Q8C0Y0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp4r4Q8C0Y0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ppp4r4Q8C0Y0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.46■□□□□ 0.87
Ppp4r4Q8C0Y0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ppp4r4Q8C0Y0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Gm22238-201ENSMUST00000175222 88 ntBASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ppp4r4Q8C0Y0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Ppp4r4Q8C0Y0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ppp4r4Q8C0Y0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ppp4r4Q8C0Y0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ppp4r4Q8C0Y0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ppp4r4Q8C0Y0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms