Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Cdk5rap1Q8BTW8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk5rap1Q8BTW8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk5rap1Q8BTW8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.42■□□□□ 0.7
Cdk5rap1Q8BTW8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk5rap1Q8BTW8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk5rap1Q8BTW8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
Cdk5rap1Q8BTW8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cdk5rap1Q8BTW8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk5rap1Q8BTW8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk5rap1Q8BTW8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk5rap1Q8BTW8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk5rap1Q8BTW8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdk5rap1Q8BTW8 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.41■□□□□ 0.7
Cdk5rap1Q8BTW8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk5rap1Q8BTW8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk5rap1Q8BTW8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk5rap1Q8BTW8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdk5rap1Q8BTW8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk5rap1Q8BTW8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk5rap1Q8BTW8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdk5rap1Q8BTW8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdk5rap1Q8BTW8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.39■□□□□ 0.69
Cdk5rap1Q8BTW8 Gm43137-201ENSMUST00000198052 594 ntBASIC19.39■□□□□ 0.69
Cdk5rap1Q8BTW8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdk5rap1Q8BTW8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdk5rap1Q8BTW8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk5rap1Q8BTW8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.38■□□□□ 0.69
Cdk5rap1Q8BTW8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.38■□□□□ 0.69
Cdk5rap1Q8BTW8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk5rap1Q8BTW8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk5rap1Q8BTW8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk5rap1Q8BTW8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdk5rap1Q8BTW8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdk5rap1Q8BTW8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.36■□□□□ 0.69
Cdk5rap1Q8BTW8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdk5rap1Q8BTW8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdk5rap1Q8BTW8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdk5rap1Q8BTW8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdk5rap1Q8BTW8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdk5rap1Q8BTW8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.36■□□□□ 0.69
Cdk5rap1Q8BTW8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdk5rap1Q8BTW8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdk5rap1Q8BTW8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdk5rap1Q8BTW8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdk5rap1Q8BTW8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdk5rap1Q8BTW8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdk5rap1Q8BTW8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdk5rap1Q8BTW8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap1Q8BTW8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdk5rap1Q8BTW8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdk5rap1Q8BTW8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
Cdk5rap1Q8BTW8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.33■□□□□ 0.68
Cdk5rap1Q8BTW8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cdk5rap1Q8BTW8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdk5rap1Q8BTW8 Serp2-204ENSMUST00000228055 705 ntBASIC19.33■□□□□ 0.68
Cdk5rap1Q8BTW8 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.33■□□□□ 0.68
Cdk5rap1Q8BTW8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdk5rap1Q8BTW8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap1Q8BTW8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms