Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf18Q8BM39 Cap2-205ENSMUST00000225824 1634 ntBASIC19.29■□□□□ 0.68
Prpf18Q8BM39 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.29■□□□□ 0.68
Prpf18Q8BM39 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf18Q8BM39 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prpf18Q8BM39 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf18Q8BM39 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf18Q8BM39 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf18Q8BM39 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Prpf18Q8BM39 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf18Q8BM39 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.28■□□□□ 0.68
Prpf18Q8BM39 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Prpf18Q8BM39 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf18Q8BM39 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf18Q8BM39 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf18Q8BM39 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf18Q8BM39 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf18Q8BM39 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf18Q8BM39 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf18Q8BM39 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf18Q8BM39 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Prpf18Q8BM39 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf18Q8BM39 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf18Q8BM39 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Prpf18Q8BM39 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf18Q8BM39 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Prpf18Q8BM39 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf18Q8BM39 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf18Q8BM39 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.24■□□□□ 0.67
Prpf18Q8BM39 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf18Q8BM39 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf18Q8BM39 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf18Q8BM39 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf18Q8BM39 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf18Q8BM39 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf18Q8BM39 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf18Q8BM39 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms