Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Col16a1Q8BLX7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC27.51■■□□□ 1.99
Col16a1Q8BLX7 Gm10033-202ENSMUST00000211874 928 ntBASIC27.51■■□□□ 1.99
Col16a1Q8BLX7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Col16a1Q8BLX7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Col16a1Q8BLX7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Col16a1Q8BLX7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Col16a1Q8BLX7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC27.5■■□□□ 1.99
Col16a1Q8BLX7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC27.49■■□□□ 1.99
Col16a1Q8BLX7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Col16a1Q8BLX7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Col16a1Q8BLX7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Col16a1Q8BLX7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
Col16a1Q8BLX7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Col16a1Q8BLX7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC27.48■■□□□ 1.99
Col16a1Q8BLX7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC27.48■■□□□ 1.99
Col16a1Q8BLX7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Col16a1Q8BLX7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Col16a1Q8BLX7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Col16a1Q8BLX7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Col16a1Q8BLX7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Col16a1Q8BLX7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Col16a1Q8BLX7 Smad6-203ENSMUST00000179458 273 ntBASIC27.47■■□□□ 1.99
Col16a1Q8BLX7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Col16a1Q8BLX7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col16a1Q8BLX7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC27.46■■□□□ 1.99
Col16a1Q8BLX7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Col16a1Q8BLX7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC27.46■■□□□ 1.99
Col16a1Q8BLX7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC27.46■■□□□ 1.99
Col16a1Q8BLX7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col16a1Q8BLX7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC27.46■■□□□ 1.99
Col16a1Q8BLX7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col16a1Q8BLX7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Col16a1Q8BLX7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Col16a1Q8BLX7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Col16a1Q8BLX7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC27.45■■□□□ 1.99
Col16a1Q8BLX7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Col16a1Q8BLX7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Col16a1Q8BLX7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Col16a1Q8BLX7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Col16a1Q8BLX7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Col16a1Q8BLX7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Col16a1Q8BLX7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Col16a1Q8BLX7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC27.43■■□□□ 1.98
Col16a1Q8BLX7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Col16a1Q8BLX7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Col16a1Q8BLX7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Col16a1Q8BLX7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Col16a1Q8BLX7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col16a1Q8BLX7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col16a1Q8BLX7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC27.42■■□□□ 1.98
Col16a1Q8BLX7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col16a1Q8BLX7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Col16a1Q8BLX7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col16a1Q8BLX7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Col16a1Q8BLX7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Col16a1Q8BLX7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Col16a1Q8BLX7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Col16a1Q8BLX7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Col16a1Q8BLX7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC27.39■■□□□ 1.98
Col16a1Q8BLX7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC27.39■■□□□ 1.98
Col16a1Q8BLX7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Col16a1Q8BLX7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col16a1Q8BLX7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col16a1Q8BLX7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Col16a1Q8BLX7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col16a1Q8BLX7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Col16a1Q8BLX7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col16a1Q8BLX7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col16a1Q8BLX7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC27.37■■□□□ 1.97
Col16a1Q8BLX7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC27.37■■□□□ 1.97
Col16a1Q8BLX7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC27.36■■□□□ 1.97
Col16a1Q8BLX7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Col16a1Q8BLX7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Col16a1Q8BLX7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Col16a1Q8BLX7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Col16a1Q8BLX7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 Gm10209-201ENSMUST00000203397 1607 ntBASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC27.35■■□□□ 1.97
Col16a1Q8BLX7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC27.34■■□□□ 1.97
Col16a1Q8BLX7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Col16a1Q8BLX7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Col16a1Q8BLX7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms