Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl3Q8BLF2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl3Q8BLF2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl3Q8BLF2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl3Q8BLF2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdkl3Q8BLF2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl3Q8BLF2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl3Q8BLF2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl3Q8BLF2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cdkl3Q8BLF2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl3Q8BLF2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cdkl3Q8BLF2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl3Q8BLF2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl3Q8BLF2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl3Q8BLF2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl3Q8BLF2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl3Q8BLF2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl3Q8BLF2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl3Q8BLF2 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl3Q8BLF2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cdkl3Q8BLF2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl3Q8BLF2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl3Q8BLF2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl3Q8BLF2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl3Q8BLF2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdkl3Q8BLF2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl3Q8BLF2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl3Q8BLF2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl3Q8BLF2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl3Q8BLF2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms