Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf38Q8BI21 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf38Q8BI21 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf38Q8BI21 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf38Q8BI21 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rnf38Q8BI21 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf38Q8BI21 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.7■□□□□ 0.74
Rnf38Q8BI21 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf38Q8BI21 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf38Q8BI21 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.7■□□□□ 0.74
Rnf38Q8BI21 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf38Q8BI21 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf38Q8BI21 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf38Q8BI21 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf38Q8BI21 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.68■□□□□ 0.74
Rnf38Q8BI21 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf38Q8BI21 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf38Q8BI21 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf38Q8BI21 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf38Q8BI21 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf38Q8BI21 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf38Q8BI21 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf38Q8BI21 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Gm5921-201ENSMUST00000075898 882 ntBASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf38Q8BI21 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf38Q8BI21 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms