Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smndc1Q8BGT7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smndc1Q8BGT7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smndc1Q8BGT7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smndc1Q8BGT7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smndc1Q8BGT7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smndc1Q8BGT7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smndc1Q8BGT7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smndc1Q8BGT7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smndc1Q8BGT7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
Smndc1Q8BGT7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smndc1Q8BGT7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smndc1Q8BGT7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smndc1Q8BGT7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smndc1Q8BGT7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smndc1Q8BGT7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.58■□□□□ 0.72
Smndc1Q8BGT7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smndc1Q8BGT7 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.58■□□□□ 0.72
Smndc1Q8BGT7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smndc1Q8BGT7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smndc1Q8BGT7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Smndc1Q8BGT7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Smndc1Q8BGT7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smndc1Q8BGT7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smndc1Q8BGT7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smndc1Q8BGT7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smndc1Q8BGT7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smndc1Q8BGT7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smndc1Q8BGT7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smndc1Q8BGT7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smndc1Q8BGT7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smndc1Q8BGT7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smndc1Q8BGT7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smndc1Q8BGT7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smndc1Q8BGT7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smndc1Q8BGT7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Smndc1Q8BGT7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smndc1Q8BGT7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Smndc1Q8BGT7 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.54■□□□□ 0.72
Smndc1Q8BGT7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smndc1Q8BGT7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Smndc1Q8BGT7 Gm5921-201ENSMUST00000075898 882 ntBASIC19.54■□□□□ 0.72
Smndc1Q8BGT7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smndc1Q8BGT7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smndc1Q8BGT7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smndc1Q8BGT7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smndc1Q8BGT7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smndc1Q8BGT7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smndc1Q8BGT7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smndc1Q8BGT7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smndc1Q8BGT7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smndc1Q8BGT7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.52■□□□□ 0.72
Smndc1Q8BGT7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smndc1Q8BGT7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smndc1Q8BGT7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.51■□□□□ 0.71
Smndc1Q8BGT7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms