Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atpaf1Q811I0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atpaf1Q811I0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atpaf1Q811I0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atpaf1Q811I0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atpaf1Q811I0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.66■□□□□ 0.26
Atpaf1Q811I0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atpaf1Q811I0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atpaf1Q811I0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atpaf1Q811I0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.66■□□□□ 0.26
Atpaf1Q811I0 Gm4799-201ENSMUST00000095396 657 ntBASIC16.66■□□□□ 0.26
Atpaf1Q811I0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atpaf1Q811I0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atpaf1Q811I0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atpaf1Q811I0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atpaf1Q811I0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Atpaf1Q811I0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atpaf1Q811I0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atpaf1Q811I0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atpaf1Q811I0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atpaf1Q811I0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atpaf1Q811I0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atpaf1Q811I0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atpaf1Q811I0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.64■□□□□ 0.25
Atpaf1Q811I0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atpaf1Q811I0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atpaf1Q811I0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.63■□□□□ 0.25
Atpaf1Q811I0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atpaf1Q811I0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atpaf1Q811I0 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.63■□□□□ 0.25
Atpaf1Q811I0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atpaf1Q811I0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atpaf1Q811I0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atpaf1Q811I0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atpaf1Q811I0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Atpaf1Q811I0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atpaf1Q811I0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Atpaf1Q811I0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Atpaf1Q811I0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Atpaf1Q811I0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atpaf1Q811I0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atpaf1Q811I0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atpaf1Q811I0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atpaf1Q811I0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atpaf1Q811I0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atpaf1Q811I0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atpaf1Q811I0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms