Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrtm4Q80XG9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrtm4Q80XG9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrtm4Q80XG9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrtm4Q80XG9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrtm4Q80XG9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrtm4Q80XG9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrtm4Q80XG9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Lrrtm4Q80XG9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrtm4Q80XG9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrtm4Q80XG9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrtm4Q80XG9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.93■□□□□ 0.78
Lrrtm4Q80XG9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.93■□□□□ 0.78
Lrrtm4Q80XG9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lrrtm4Q80XG9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrtm4Q80XG9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrtm4Q80XG9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrtm4Q80XG9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrtm4Q80XG9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrtm4Q80XG9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrtm4Q80XG9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Lrrtm4Q80XG9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrtm4Q80XG9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrtm4Q80XG9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lrrtm4Q80XG9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lrrtm4Q80XG9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrtm4Q80XG9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrtm4Q80XG9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrtm4Q80XG9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrtm4Q80XG9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrtm4Q80XG9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrtm4Q80XG9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lrrtm4Q80XG9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrtm4Q80XG9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.89■□□□□ 0.77
Lrrtm4Q80XG9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrtm4Q80XG9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrtm4Q80XG9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.89■□□□□ 0.77
Lrrtm4Q80XG9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrtm4Q80XG9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrtm4Q80XG9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrtm4Q80XG9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrtm4Q80XG9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm4Q80XG9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm4Q80XG9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm4Q80XG9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.88■□□□□ 0.77
Lrrtm4Q80XG9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm4Q80XG9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm4Q80XG9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm4Q80XG9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm4Q80XG9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm4Q80XG9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm4Q80XG9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Lrrtm4Q80XG9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Lrrtm4Q80XG9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm4Q80XG9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.87■□□□□ 0.77
Lrrtm4Q80XG9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm4Q80XG9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm4Q80XG9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm4Q80XG9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrtm4Q80XG9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lrrtm4Q80XG9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lrrtm4Q80XG9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrtm4Q80XG9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.86■□□□□ 0.77
Lrrtm4Q80XG9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrtm4Q80XG9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.86■□□□□ 0.77
Lrrtm4Q80XG9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrtm4Q80XG9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrtm4Q80XG9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm4Q80XG9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm4Q80XG9 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms