Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp38Q80UU2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.52■□□□□ 0.88
Rpp38Q80UU2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.52■□□□□ 0.88
Rpp38Q80UU2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.52■□□□□ 0.88
Rpp38Q80UU2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.52■□□□□ 0.88
Rpp38Q80UU2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp38Q80UU2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpp38Q80UU2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpp38Q80UU2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp38Q80UU2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp38Q80UU2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp38Q80UU2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp38Q80UU2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.51■□□□□ 0.87
Rpp38Q80UU2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp38Q80UU2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rpp38Q80UU2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rpp38Q80UU2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpp38Q80UU2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.5■□□□□ 0.87
Rpp38Q80UU2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpp38Q80UU2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rpp38Q80UU2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpp38Q80UU2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpp38Q80UU2 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.49■□□□□ 0.87
Rpp38Q80UU2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpp38Q80UU2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Rpp38Q80UU2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpp38Q80UU2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp38Q80UU2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp38Q80UU2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.47■□□□□ 0.87
Rpp38Q80UU2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpp38Q80UU2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpp38Q80UU2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpp38Q80UU2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.46■□□□□ 0.87
Rpp38Q80UU2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rpp38Q80UU2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpp38Q80UU2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpp38Q80UU2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpp38Q80UU2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.45■□□□□ 0.86
Rpp38Q80UU2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpp38Q80UU2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpp38Q80UU2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.43■□□□□ 0.86
Rpp38Q80UU2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpp38Q80UU2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.43■□□□□ 0.86
Rpp38Q80UU2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rpp38Q80UU2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Rpp38Q80UU2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rpp38Q80UU2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms