Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubr5Q80TP3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ubr5Q80TP3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ubr5Q80TP3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ubr5Q80TP3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr5Q80TP3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ubr5Q80TP3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr5Q80TP3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr5Q80TP3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr5Q80TP3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr5Q80TP3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ubr5Q80TP3 Gm12441-201ENSMUST00000121806 588 ntBASIC18.13■□□□□ 0.49
Ubr5Q80TP3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.13■□□□□ 0.49
Ubr5Q80TP3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr5Q80TP3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr5Q80TP3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Ubr5Q80TP3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr5Q80TP3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr5Q80TP3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr5Q80TP3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ubr5Q80TP3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr5Q80TP3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.12■□□□□ 0.49
Ubr5Q80TP3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ubr5Q80TP3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr5Q80TP3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr5Q80TP3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.12■□□□□ 0.49
Ubr5Q80TP3 Mir7071-201ENSMUST00000184847 69 ntBASIC18.12■□□□□ 0.49
Ubr5Q80TP3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.12■□□□□ 0.49
Ubr5Q80TP3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr5Q80TP3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ubr5Q80TP3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ubr5Q80TP3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr5Q80TP3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr5Q80TP3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.11■□□□□ 0.49
Ubr5Q80TP3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Ubr5Q80TP3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.11■□□□□ 0.49
Ubr5Q80TP3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr5Q80TP3 Gm13148-201ENSMUST00000118892 745 ntBASIC18.11■□□□□ 0.49
Ubr5Q80TP3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ubr5Q80TP3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Gm11421-201ENSMUST00000122124 294 ntBASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ubr5Q80TP3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Gm20760-201ENSMUST00000179197 648 ntBASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.09■□□□□ 0.49
Ubr5Q80TP3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ubr5Q80TP3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ubr5Q80TP3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ubr5Q80TP3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ubr5Q80TP3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ubr5Q80TP3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ubr5Q80TP3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.08■□□□□ 0.48
Ubr5Q80TP3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr5Q80TP3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.07■□□□□ 0.48
Ubr5Q80TP3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ubr5Q80TP3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ubr5Q80TP3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr5Q80TP3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr5Q80TP3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr5Q80TP3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr5Q80TP3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr5Q80TP3 Gm7977-201ENSMUST00000193787 748 ntBASIC18.06■□□□□ 0.48
Ubr5Q80TP3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.06■□□□□ 0.48
Ubr5Q80TP3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.06■□□□□ 0.48
Ubr5Q80TP3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr5Q80TP3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms