Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otub1Q7TQI3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Otub1Q7TQI3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Otub1Q7TQI3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otub1Q7TQI3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub1Q7TQI3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Otub1Q7TQI3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Otub1Q7TQI3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Otub1Q7TQI3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.33■□□□□ 0.69
Otub1Q7TQI3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Otub1Q7TQI3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Otub1Q7TQI3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Otub1Q7TQI3 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.32■□□□□ 0.68
Otub1Q7TQI3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Otub1Q7TQI3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Otub1Q7TQI3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Otub1Q7TQI3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Otub1Q7TQI3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Otub1Q7TQI3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Otub1Q7TQI3 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.31■□□□□ 0.68
Otub1Q7TQI3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Otub1Q7TQI3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Otub1Q7TQI3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Otub1Q7TQI3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Otub1Q7TQI3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Otub1Q7TQI3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otub1Q7TQI3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Otub1Q7TQI3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Otub1Q7TQI3 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.3■□□□□ 0.68
Otub1Q7TQI3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Otub1Q7TQI3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otub1Q7TQI3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otub1Q7TQI3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Otub1Q7TQI3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.3■□□□□ 0.68
Otub1Q7TQI3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Otub1Q7TQI3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Otub1Q7TQI3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.29■□□□□ 0.68
Otub1Q7TQI3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Otub1Q7TQI3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Otub1Q7TQI3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.29■□□□□ 0.68
Otub1Q7TQI3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otub1Q7TQI3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otub1Q7TQI3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otub1Q7TQI3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otub1Q7TQI3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.28■□□□□ 0.68
Otub1Q7TQI3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otub1Q7TQI3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Otub1Q7TQI3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otub1Q7TQI3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otub1Q7TQI3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Otub1Q7TQI3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
Otub1Q7TQI3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Otub1Q7TQI3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Otub1Q7TQI3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Otub1Q7TQI3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Otub1Q7TQI3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Otub1Q7TQI3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Otub1Q7TQI3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Otub1Q7TQI3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Otub1Q7TQI3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Otub1Q7TQI3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.26■□□□□ 0.67
Otub1Q7TQI3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.26■□□□□ 0.67
Otub1Q7TQI3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Otub1Q7TQI3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Otub1Q7TQI3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Otub1Q7TQI3 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otub1Q7TQI3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms