Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vma21Q78T54 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vma21Q78T54 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vma21Q78T54 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vma21Q78T54 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vma21Q78T54 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.59■□□□□ 0.25
Vma21Q78T54 Notumos-201ENSMUST00000151998 2659 ntBASIC16.59■□□□□ 0.25
Vma21Q78T54 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vma21Q78T54 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vma21Q78T54 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.59■□□□□ 0.25
Vma21Q78T54 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vma21Q78T54 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vma21Q78T54 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vma21Q78T54 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vma21Q78T54 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vma21Q78T54 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Vma21Q78T54 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vma21Q78T54 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vma21Q78T54 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vma21Q78T54 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.58■□□□□ 0.24
Vma21Q78T54 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vma21Q78T54 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vma21Q78T54 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vma21Q78T54 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vma21Q78T54 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vma21Q78T54 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vma21Q78T54 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Vma21Q78T54 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vma21Q78T54 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vma21Q78T54 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vma21Q78T54 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Vma21Q78T54 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vma21Q78T54 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vma21Q78T54 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Vma21Q78T54 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vma21Q78T54 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vma21Q78T54 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.56■□□□□ 0.24
Vma21Q78T54 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.56■□□□□ 0.24
Vma21Q78T54 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vma21Q78T54 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.56■□□□□ 0.24
Vma21Q78T54 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.55■□□□□ 0.24
Vma21Q78T54 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vma21Q78T54 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vma21Q78T54 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Vma21Q78T54 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vma21Q78T54 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.54■□□□□ 0.24
Vma21Q78T54 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.54■□□□□ 0.24
Vma21Q78T54 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.54■□□□□ 0.24
Vma21Q78T54 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.54■□□□□ 0.24
Vma21Q78T54 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.54■□□□□ 0.24
Vma21Q78T54 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vma21Q78T54 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vma21Q78T54 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vma21Q78T54 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vma21Q78T54 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vma21Q78T54 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vma21Q78T54 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vma21Q78T54 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vma21Q78T54 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vma21Q78T54 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Vma21Q78T54 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms