Protein–RNA interactions for Protein: Q78PG9

Ccdc25, Coiled-coil domain-containing protein 25, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc25Q78PG9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc25Q78PG9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.31■■□□□ 1
Ccdc25Q78PG9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc25Q78PG9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc25Q78PG9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc25Q78PG9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc25Q78PG9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc25Q78PG9 Mir6538-201ENSMUST00000183713 110 ntBASIC21.3■■□□□ 1
Ccdc25Q78PG9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc25Q78PG9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ccdc25Q78PG9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ccdc25Q78PG9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc25Q78PG9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc25Q78PG9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc25Q78PG9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc25Q78PG9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc25Q78PG9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ccdc25Q78PG9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc25Q78PG9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc25Q78PG9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc25Q78PG9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.26■□□□□ 0.99
Ccdc25Q78PG9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc25Q78PG9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc25Q78PG9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.25■□□□□ 0.99
Ccdc25Q78PG9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc25Q78PG9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc25Q78PG9 Gm14523-201ENSMUST00000117260 558 ntBASIC21.24■□□□□ 0.99
Ccdc25Q78PG9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc25Q78PG9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc25Q78PG9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Gm11175-201ENSMUST00000116172 543 ntBASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc25Q78PG9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc25Q78PG9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc25Q78PG9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Ccdc25Q78PG9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc25Q78PG9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc25Q78PG9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc25Q78PG9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc25Q78PG9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc25Q78PG9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms