Protein–RNA interactions for Protein: Q6PE55

Pdgfrl, Platelet-derived growth factor receptor-like protein, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrlQ6PE55 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PdgfrlQ6PE55 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PdgfrlQ6PE55 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PdgfrlQ6PE55 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PdgfrlQ6PE55 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.21■□□□□ 0.99
PdgfrlQ6PE55 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PdgfrlQ6PE55 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PdgfrlQ6PE55 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.21■□□□□ 0.99
PdgfrlQ6PE55 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PdgfrlQ6PE55 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PdgfrlQ6PE55 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Gm26833-201ENSMUST00000180899 440 ntBASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfrlQ6PE55 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Gm5874-201ENSMUST00000096101 508 ntBASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PdgfrlQ6PE55 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfrlQ6PE55 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfrlQ6PE55 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PdgfrlQ6PE55 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfrlQ6PE55 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.17■□□□□ 0.98
PdgfrlQ6PE55 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfrlQ6PE55 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfrlQ6PE55 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrlQ6PE55 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PdgfrlQ6PE55 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.16■□□□□ 0.98
PdgfrlQ6PE55 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrlQ6PE55 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrlQ6PE55 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrlQ6PE55 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrlQ6PE55 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrlQ6PE55 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfrlQ6PE55 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfrlQ6PE55 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfrlQ6PE55 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.15■□□□□ 0.98
PdgfrlQ6PE55 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.15■□□□□ 0.98
PdgfrlQ6PE55 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfrlQ6PE55 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfrlQ6PE55 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PdgfrlQ6PE55 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
PdgfrlQ6PE55 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfrlQ6PE55 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PdgfrlQ6PE55 Gm43060-201ENSMUST00000200621 289 ntBASIC21.14■□□□□ 0.97
PdgfrlQ6PE55 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfrlQ6PE55 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfrlQ6PE55 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfrlQ6PE55 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfrlQ6PE55 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfrlQ6PE55 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfrlQ6PE55 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfrlQ6PE55 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.13■□□□□ 0.97
PdgfrlQ6PE55 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfrlQ6PE55 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
PdgfrlQ6PE55 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PdgfrlQ6PE55 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.12■□□□□ 0.97
PdgfrlQ6PE55 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.12■□□□□ 0.97
PdgfrlQ6PE55 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.12■□□□□ 0.97
PdgfrlQ6PE55 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.12■□□□□ 0.97
PdgfrlQ6PE55 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrlQ6PE55 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrlQ6PE55 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrlQ6PE55 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PdgfrlQ6PE55 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PdgfrlQ6PE55 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms