Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc36Q6PDM4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc36Q6PDM4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ccdc36Q6PDM4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc36Q6PDM4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Gm7332-201ENSMUST00000118351 454 ntBASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Gm12366-201ENSMUST00000121722 873 ntBASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Gm5786-201ENSMUST00000085368 882 ntBASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc36Q6PDM4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc36Q6PDM4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc36Q6PDM4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc36Q6PDM4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ccdc36Q6PDM4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc36Q6PDM4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc36Q6PDM4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc36Q6PDM4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc36Q6PDM4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc36Q6PDM4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc36Q6PDM4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc36Q6PDM4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc36Q6PDM4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc36Q6PDM4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc36Q6PDM4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc36Q6PDM4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc36Q6PDM4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc36Q6PDM4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc36Q6PDM4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms