Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srsf1Q6PDM2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Srsf1Q6PDM2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Srsf1Q6PDM2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Srsf1Q6PDM2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Srsf1Q6PDM2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Srsf1Q6PDM2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.83■□□□□ 0.44
Srsf1Q6PDM2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Srsf1Q6PDM2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Srsf1Q6PDM2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Srsf1Q6PDM2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.82■□□□□ 0.44
Srsf1Q6PDM2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srsf1Q6PDM2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.82■□□□□ 0.44
Srsf1Q6PDM2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Srsf1Q6PDM2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Srsf1Q6PDM2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srsf1Q6PDM2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Srsf1Q6PDM2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srsf1Q6PDM2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srsf1Q6PDM2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Srsf1Q6PDM2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.81■□□□□ 0.44
Srsf1Q6PDM2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Srsf1Q6PDM2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Srsf1Q6PDM2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.81■□□□□ 0.44
Srsf1Q6PDM2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srsf1Q6PDM2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srsf1Q6PDM2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.8■□□□□ 0.44
Srsf1Q6PDM2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srsf1Q6PDM2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Srsf1Q6PDM2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Srsf1Q6PDM2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Srsf1Q6PDM2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.8■□□□□ 0.44
Srsf1Q6PDM2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.8■□□□□ 0.44
Srsf1Q6PDM2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Srsf1Q6PDM2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Srsf1Q6PDM2 Mir6982-201ENSMUST00000184354 68 ntBASIC17.77■□□□□ 0.44
Srsf1Q6PDM2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.77■□□□□ 0.44
Srsf1Q6PDM2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Srsf1Q6PDM2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Srsf1Q6PDM2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Srsf1Q6PDM2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Srsf1Q6PDM2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Srsf1Q6PDM2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Gm13836-201ENSMUST00000121159 501 ntBASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Srsf1Q6PDM2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Gm43530-201ENSMUST00000195920 274 ntBASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Srsf1Q6PDM2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srsf1Q6PDM2 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.73■□□□□ 0.43
Srsf1Q6PDM2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Srsf1Q6PDM2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms