Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd3Q6P9Z1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd3Q6P9Z1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd3Q6P9Z1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd3Q6P9Z1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd3Q6P9Z1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd3Q6P9Z1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smarcd3Q6P9Z1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd3Q6P9Z1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd3Q6P9Z1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd3Q6P9Z1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smarcd3Q6P9Z1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd3Q6P9Z1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd3Q6P9Z1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd3Q6P9Z1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd3Q6P9Z1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd3Q6P9Z1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcd3Q6P9Z1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Smarcd3Q6P9Z1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd3Q6P9Z1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd3Q6P9Z1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd3Q6P9Z1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcd3Q6P9Z1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.64■□□□□ 0.57
Smarcd3Q6P9Z1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcd3Q6P9Z1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd3Q6P9Z1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd3Q6P9Z1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd3Q6P9Z1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.62■□□□□ 0.57
Smarcd3Q6P9Z1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd3Q6P9Z1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd3Q6P9Z1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd3Q6P9Z1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smarcd3Q6P9Z1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd3Q6P9Z1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd3Q6P9Z1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd3Q6P9Z1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd3Q6P9Z1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.6■□□□□ 0.57
Smarcd3Q6P9Z1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Smarcd3Q6P9Z1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.6■□□□□ 0.57
Smarcd3Q6P9Z1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Smarcd3Q6P9Z1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd3Q6P9Z1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd3Q6P9Z1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcd3Q6P9Z1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcd3Q6P9Z1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcd3Q6P9Z1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcd3Q6P9Z1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd3Q6P9Z1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms