Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.65■■□□□ 1.54
Best3Q6H1V1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.65■■□□□ 1.54
Best3Q6H1V1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.65■■□□□ 1.54
Best3Q6H1V1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC24.65■■□□□ 1.54
Best3Q6H1V1 Gm40848-201ENSMUST00000221998 324 ntBASIC24.65■■□□□ 1.54
Best3Q6H1V1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Best3Q6H1V1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Best3Q6H1V1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Best3Q6H1V1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Best3Q6H1V1 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.64■■□□□ 1.54
Best3Q6H1V1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Best3Q6H1V1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Best3Q6H1V1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Best3Q6H1V1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Best3Q6H1V1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.64■■□□□ 1.54
Best3Q6H1V1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Best3Q6H1V1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Best3Q6H1V1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Best3Q6H1V1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Best3Q6H1V1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24.63■■□□□ 1.53
Best3Q6H1V1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
Best3Q6H1V1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Best3Q6H1V1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC24.63■■□□□ 1.53
Best3Q6H1V1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Best3Q6H1V1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Best3Q6H1V1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Best3Q6H1V1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC24.62■■□□□ 1.53
Best3Q6H1V1 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.62■■□□□ 1.53
Best3Q6H1V1 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.62■■□□□ 1.53
Best3Q6H1V1 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.62■■□□□ 1.53
Best3Q6H1V1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Best3Q6H1V1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.61■■□□□ 1.53
Best3Q6H1V1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Best3Q6H1V1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Best3Q6H1V1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.61■■□□□ 1.53
Best3Q6H1V1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Best3Q6H1V1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.61■■□□□ 1.53
Best3Q6H1V1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Best3Q6H1V1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Best3Q6H1V1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Best3Q6H1V1 Gm42642-201ENSMUST00000200683 355 ntBASIC24.6■■□□□ 1.53
Best3Q6H1V1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC24.6■■□□□ 1.53
Best3Q6H1V1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Best3Q6H1V1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Best3Q6H1V1 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.6■■□□□ 1.53
Best3Q6H1V1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Best3Q6H1V1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Best3Q6H1V1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Best3Q6H1V1 Gm42569-201ENSMUST00000200539 472 ntBASIC24.59■■□□□ 1.53
Best3Q6H1V1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.59■■□□□ 1.53
Best3Q6H1V1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Best3Q6H1V1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Best3Q6H1V1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Best3Q6H1V1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Best3Q6H1V1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Best3Q6H1V1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC24.58■■□□□ 1.53
Best3Q6H1V1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.58■■□□□ 1.53
Best3Q6H1V1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC24.58■■□□□ 1.53
Best3Q6H1V1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Best3Q6H1V1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Best3Q6H1V1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC24.58■■□□□ 1.52
Best3Q6H1V1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Best3Q6H1V1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Best3Q6H1V1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Best3Q6H1V1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Best3Q6H1V1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Best3Q6H1V1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Best3Q6H1V1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC24.56■■□□□ 1.52
Best3Q6H1V1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Best3Q6H1V1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Best3Q6H1V1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.56■■□□□ 1.52
Best3Q6H1V1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC24.56■■□□□ 1.52
Best3Q6H1V1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Best3Q6H1V1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Best3Q6H1V1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Best3Q6H1V1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Best3Q6H1V1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Best3Q6H1V1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Best3Q6H1V1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Best3Q6H1V1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Best3Q6H1V1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Best3Q6H1V1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Best3Q6H1V1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Best3Q6H1V1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Best3Q6H1V1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Best3Q6H1V1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Best3Q6H1V1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.53■■□□□ 1.52
Best3Q6H1V1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Best3Q6H1V1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Best3Q6H1V1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Best3Q6H1V1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Best3Q6H1V1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Best3Q6H1V1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Best3Q6H1V1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Best3Q6H1V1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Best3Q6H1V1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Best3Q6H1V1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC24.52■■□□□ 1.52
Best3Q6H1V1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Best3Q6H1V1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Best3Q6H1V1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms