Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col11a2Q64739 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC25.46■■□□□ 1.67
Col11a2Q64739 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Col11a2Q64739 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a2Q64739 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Col11a2Q64739 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a2Q64739 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a2Q64739 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a2Q64739 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a2Q64739 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Col11a2Q64739 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Col11a2Q64739 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col11a2Q64739 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col11a2Q64739 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col11a2Q64739 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col11a2Q64739 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col11a2Q64739 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col11a2Q64739 Gm11421-201ENSMUST00000122124 294 ntBASIC25.43■■□□□ 1.66
Col11a2Q64739 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC25.43■■□□□ 1.66
Col11a2Q64739 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col11a2Q64739 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.43■■□□□ 1.66
Col11a2Q64739 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col11a2Q64739 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col11a2Q64739 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Col11a2Q64739 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC25.43■■□□□ 1.66
Col11a2Q64739 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col11a2Q64739 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Col11a2Q64739 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Col11a2Q64739 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC25.42■■□□□ 1.66
Col11a2Q64739 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col11a2Q64739 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col11a2Q64739 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col11a2Q64739 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col11a2Q64739 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col11a2Q64739 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col11a2Q64739 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Col11a2Q64739 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC25.41■■□□□ 1.66
Col11a2Q64739 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC25.4■■□□□ 1.66
Col11a2Q64739 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC25.4■■□□□ 1.66
Col11a2Q64739 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC25.4■■□□□ 1.66
Col11a2Q64739 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Col11a2Q64739 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col11a2Q64739 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.39■■□□□ 1.66
Col11a2Q64739 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Col11a2Q64739 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
Col11a2Q64739 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col11a2Q64739 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.38■■□□□ 1.65
Col11a2Q64739 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC25.38■■□□□ 1.65
Col11a2Q64739 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col11a2Q64739 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col11a2Q64739 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Col11a2Q64739 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC25.37■■□□□ 1.65
Col11a2Q64739 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC25.37■■□□□ 1.65
Col11a2Q64739 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a2Q64739 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a2Q64739 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a2Q64739 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a2Q64739 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a2Q64739 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a2Q64739 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a2Q64739 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC25.37■■□□□ 1.65
Col11a2Q64739 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a2Q64739 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col11a2Q64739 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col11a2Q64739 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC25.36■■□□□ 1.65
Col11a2Q64739 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col11a2Q64739 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Col11a2Q64739 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Col11a2Q64739 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col11a2Q64739 Gm12933-201ENSMUST00000120203 872 ntBASIC25.35■■□□□ 1.65
Col11a2Q64739 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Col11a2Q64739 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC25.35■■□□□ 1.65
Col11a2Q64739 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC25.35■■□□□ 1.65
Col11a2Q64739 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col11a2Q64739 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col11a2Q64739 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col11a2Q64739 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col11a2Q64739 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col11a2Q64739 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.33■■□□□ 1.65
Col11a2Q64739 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Col11a2Q64739 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col11a2Q64739 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col11a2Q64739 Gm27045-201ENSMUST00000182145 1402 ntBASIC25.33■■□□□ 1.65
Col11a2Q64739 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a2Q64739 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a2Q64739 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a2Q64739 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a2Q64739 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a2Q64739 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a2Q64739 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a2Q64739 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a2Q64739 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col11a2Q64739 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col11a2Q64739 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Col11a2Q64739 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Col11a2Q64739 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col11a2Q64739 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col11a2Q64739 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC25.31■■□□□ 1.64
Col11a2Q64739 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Col11a2Q64739 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms