Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six1Q62231 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.14■□□□□ 0.97
Six1Q62231 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.14■□□□□ 0.97
Six1Q62231 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six1Q62231 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six1Q62231 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six1Q62231 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Six1Q62231 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six1Q62231 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six1Q62231 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six1Q62231 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six1Q62231 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Six1Q62231 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six1Q62231 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six1Q62231 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six1Q62231 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Six1Q62231 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Six1Q62231 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Six1Q62231 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Six1Q62231 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.12■□□□□ 0.97
Six1Q62231 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Six1Q62231 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Six1Q62231 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six1Q62231 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six1Q62231 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Six1Q62231 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six1Q62231 Golph3-202ENSMUST00000226517 2359 ntBASIC21.11■□□□□ 0.97
Six1Q62231 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six1Q62231 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six1Q62231 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six1Q62231 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six1Q62231 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.1■□□□□ 0.97
Six1Q62231 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.1■□□□□ 0.97
Six1Q62231 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.1■□□□□ 0.97
Six1Q62231 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six1Q62231 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six1Q62231 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six1Q62231 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Six1Q62231 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Six1Q62231 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six1Q62231 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Six1Q62231 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six1Q62231 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six1Q62231 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six1Q62231 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.09■□□□□ 0.97
Six1Q62231 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six1Q62231 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Six1Q62231 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Six1Q62231 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.08■□□□□ 0.97
Six1Q62231 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.08■□□□□ 0.97
Six1Q62231 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six1Q62231 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six1Q62231 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six1Q62231 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six1Q62231 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six1Q62231 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Six1Q62231 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six1Q62231 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Six1Q62231 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six1Q62231 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.06■□□□□ 0.96
Six1Q62231 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six1Q62231 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six1Q62231 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Six1Q62231 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six1Q62231 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six1Q62231 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six1Q62231 Gm43566-201ENSMUST00000196851 808 ntBASIC21.05■□□□□ 0.96
Six1Q62231 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six1Q62231 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Six1Q62231 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six1Q62231 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six1Q62231 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six1Q62231 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.04■□□□□ 0.96
Six1Q62231 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.04■□□□□ 0.96
Six1Q62231 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six1Q62231 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six1Q62231 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six1Q62231 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Six1Q62231 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.03■□□□□ 0.96
Six1Q62231 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.03■□□□□ 0.96
Six1Q62231 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six1Q62231 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six1Q62231 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Six1Q62231 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Six1Q62231 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Six1Q62231 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six1Q62231 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.02■□□□□ 0.96
Six1Q62231 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
Six1Q62231 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six1Q62231 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six1Q62231 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.02■□□□□ 0.96
Six1Q62231 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Six1Q62231 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.01■□□□□ 0.95
Six1Q62231 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six1Q62231 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six1Q62231 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.01■□□□□ 0.95
Six1Q62231 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Six1Q62231 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six1Q62231 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Six1Q62231 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms