Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SspnQ62147 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SspnQ62147 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SspnQ62147 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SspnQ62147 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SspnQ62147 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SspnQ62147 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SspnQ62147 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SspnQ62147 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SspnQ62147 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Gm13238-201ENSMUST00000117655 780 ntBASIC16.97■□□□□ 0.31
SspnQ62147 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.97■□□□□ 0.31
SspnQ62147 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SspnQ62147 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SspnQ62147 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SspnQ62147 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SspnQ62147 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SspnQ62147 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SspnQ62147 Gm43566-201ENSMUST00000196851 808 ntBASIC16.96■□□□□ 0.31
SspnQ62147 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SspnQ62147 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SspnQ62147 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SspnQ62147 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SspnQ62147 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SspnQ62147 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SspnQ62147 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SspnQ62147 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SspnQ62147 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SspnQ62147 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.95■□□□□ 0.3
SspnQ62147 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.95■□□□□ 0.3
SspnQ62147 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SspnQ62147 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SspnQ62147 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SspnQ62147 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.94■□□□□ 0.3
SspnQ62147 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.94■□□□□ 0.3
SspnQ62147 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SspnQ62147 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.94■□□□□ 0.3
SspnQ62147 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SspnQ62147 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SspnQ62147 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SspnQ62147 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.93■□□□□ 0.3
SspnQ62147 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SspnQ62147 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SspnQ62147 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SspnQ62147 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SspnQ62147 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SspnQ62147 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SspnQ62147 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SspnQ62147 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.91■□□□□ 0.3
SspnQ62147 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SspnQ62147 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SspnQ62147 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SspnQ62147 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
SspnQ62147 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SspnQ62147 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.91■□□□□ 0.3
SspnQ62147 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
SspnQ62147 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.91■□□□□ 0.3
SspnQ62147 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SspnQ62147 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SspnQ62147 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SspnQ62147 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.9■□□□□ 0.3
SspnQ62147 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.9■□□□□ 0.3
SspnQ62147 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.9■□□□□ 0.3
SspnQ62147 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.89■□□□□ 0.3
SspnQ62147 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SspnQ62147 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
SspnQ62147 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SspnQ62147 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SspnQ62147 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SspnQ62147 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SspnQ62147 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms