Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd47Q61735 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Cd47Q61735 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 Gm13238-201ENSMUST00000117655 780 ntBASIC18.54■□□□□ 0.56
Cd47Q61735 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd47Q61735 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd47Q61735 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd47Q61735 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.53■□□□□ 0.56
Cd47Q61735 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd47Q61735 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd47Q61735 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd47Q61735 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.52■□□□□ 0.56
Cd47Q61735 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.52■□□□□ 0.56
Cd47Q61735 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cd47Q61735 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd47Q61735 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cd47Q61735 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.52■□□□□ 0.56
Cd47Q61735 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cd47Q61735 Gm5921-201ENSMUST00000075898 882 ntBASIC18.52■□□□□ 0.56
Cd47Q61735 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cd47Q61735 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cd47Q61735 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cd47Q61735 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.51■□□□□ 0.55
Cd47Q61735 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cd47Q61735 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd47Q61735 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cd47Q61735 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd47Q61735 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.51■□□□□ 0.55
Cd47Q61735 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cd47Q61735 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd47Q61735 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cd47Q61735 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd47Q61735 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd47Q61735 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd47Q61735 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.5■□□□□ 0.55
Cd47Q61735 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd47Q61735 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.5■□□□□ 0.55
Cd47Q61735 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd47Q61735 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd47Q61735 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd47Q61735 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.5■□□□□ 0.55
Cd47Q61735 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd47Q61735 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Cd47Q61735 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd47Q61735 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd47Q61735 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd47Q61735 Gm43566-201ENSMUST00000196851 808 ntBASIC18.49■□□□□ 0.55
Cd47Q61735 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cd47Q61735 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd47Q61735 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd47Q61735 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd47Q61735 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd47Q61735 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd47Q61735 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cd47Q61735 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cd47Q61735 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd47Q61735 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd47Q61735 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cd47Q61735 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd47Q61735 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cd47Q61735 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.48■□□□□ 0.55
Cd47Q61735 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cd47Q61735 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd47Q61735 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cd47Q61735 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cd47Q61735 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cd47Q61735 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd47Q61735 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd47Q61735 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cd47Q61735 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd47Q61735 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd47Q61735 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Cd47Q61735 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd47Q61735 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd47Q61735 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cd47Q61735 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd47Q61735 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cd47Q61735 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cd47Q61735 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Cd47Q61735 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd47Q61735 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cd47Q61735 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd47Q61735 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.44■□□□□ 0.54
Cd47Q61735 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd47Q61735 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd47Q61735 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd47Q61735 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd47Q61735 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd47Q61735 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd47Q61735 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cd47Q61735 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd47Q61735 Golph3-202ENSMUST00000226517 2359 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms