Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox17Q61473 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox17Q61473 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.18■□□□□ 0.66
Sox17Q61473 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Sox17Q61473 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox17Q61473 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox17Q61473 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox17Q61473 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox17Q61473 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox17Q61473 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.17■□□□□ 0.66
Sox17Q61473 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Sox17Q61473 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.17■□□□□ 0.66
Sox17Q61473 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox17Q61473 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox17Q61473 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox17Q61473 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox17Q61473 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox17Q61473 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox17Q61473 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox17Q61473 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.16■□□□□ 0.66
Sox17Q61473 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox17Q61473 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.16■□□□□ 0.66
Sox17Q61473 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox17Q61473 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox17Q61473 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox17Q61473 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.15■□□□□ 0.66
Sox17Q61473 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox17Q61473 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox17Q61473 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Sox17Q61473 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Sox17Q61473 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox17Q61473 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox17Q61473 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sox17Q61473 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.14■□□□□ 0.65
Sox17Q61473 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sox17Q61473 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sox17Q61473 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox17Q61473 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox17Q61473 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.14■□□□□ 0.65
Sox17Q61473 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sox17Q61473 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.13■□□□□ 0.65
Sox17Q61473 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox17Q61473 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox17Q61473 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox17Q61473 Gm11687-201ENSMUST00000118911 886 ntBASIC19.13■□□□□ 0.65
Sox17Q61473 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sox17Q61473 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.13■□□□□ 0.65
Sox17Q61473 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox17Q61473 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sox17Q61473 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox17Q61473 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox17Q61473 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox17Q61473 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sox17Q61473 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.12■□□□□ 0.65
Sox17Q61473 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.11■□□□□ 0.65
Sox17Q61473 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox17Q61473 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox17Q61473 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox17Q61473 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Sox17Q61473 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox17Q61473 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox17Q61473 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox17Q61473 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
Sox17Q61473 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.09■□□□□ 0.65
Sox17Q61473 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox17Q61473 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sox17Q61473 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Sox17Q61473 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sox17Q61473 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms