Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1eQ61290 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1eQ61290 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.37■□□□□ 0.85
Cacna1eQ61290 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.37■□□□□ 0.85
Cacna1eQ61290 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1eQ61290 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1eQ61290 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1eQ61290 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1eQ61290 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1eQ61290 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Cacna1eQ61290 Gm40848-201ENSMUST00000221998 324 ntBASIC20.35■□□□□ 0.85
Cacna1eQ61290 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1eQ61290 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1eQ61290 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cacna1eQ61290 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cacna1eQ61290 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.34■□□□□ 0.85
Cacna1eQ61290 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 Gm27405-201ENSMUST00000184201 112 ntBASIC20.34■□□□□ 0.85
Cacna1eQ61290 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1eQ61290 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacna1eQ61290 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacna1eQ61290 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacna1eQ61290 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cacna1eQ61290 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cacna1eQ61290 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1eQ61290 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1eQ61290 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.32■□□□□ 0.84
Cacna1eQ61290 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.32■□□□□ 0.84
Cacna1eQ61290 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1eQ61290 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.32■□□□□ 0.84
Cacna1eQ61290 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.32■□□□□ 0.84
Cacna1eQ61290 Gm10033-202ENSMUST00000211874 928 ntBASIC20.32■□□□□ 0.84
Cacna1eQ61290 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1eQ61290 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1eQ61290 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1eQ61290 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Cacna1eQ61290 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1eQ61290 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1eQ61290 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1eQ61290 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1eQ61290 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1eQ61290 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Cacna1eQ61290 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1eQ61290 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1eQ61290 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.3■□□□□ 0.84
Cacna1eQ61290 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1eQ61290 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.3■□□□□ 0.84
Cacna1eQ61290 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1eQ61290 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.29■□□□□ 0.84
Cacna1eQ61290 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.29■□□□□ 0.84
Cacna1eQ61290 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.29■□□□□ 0.84
Cacna1eQ61290 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.29■□□□□ 0.84
Cacna1eQ61290 Gm43060-201ENSMUST00000200621 289 ntBASIC20.29■□□□□ 0.84
Cacna1eQ61290 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1eQ61290 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1eQ61290 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cacna1eQ61290 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1eQ61290 Gm7291-201ENSMUST00000199147 382 ntBASIC20.29■□□□□ 0.84
Cacna1eQ61290 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1eQ61290 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1eQ61290 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.28■□□□□ 0.84
Cacna1eQ61290 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1eQ61290 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1eQ61290 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.28■□□□□ 0.84
Cacna1eQ61290 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1eQ61290 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.28■□□□□ 0.84
Cacna1eQ61290 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.28■□□□□ 0.84
Cacna1eQ61290 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1eQ61290 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1eQ61290 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cacna1eQ61290 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cacna1eQ61290 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms