Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.5■■□□□ 1.35
Col11a1Q61245 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.5■■□□□ 1.35
Col11a1Q61245 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a1Q61245 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a1Q61245 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a1Q61245 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Col11a1Q61245 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a1Q61245 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col11a1Q61245 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Col11a1Q61245 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Col11a1Q61245 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col11a1Q61245 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col11a1Q61245 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col11a1Q61245 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col11a1Q61245 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col11a1Q61245 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col11a1Q61245 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col11a1Q61245 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Col11a1Q61245 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col11a1Q61245 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col11a1Q61245 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col11a1Q61245 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col11a1Q61245 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col11a1Q61245 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col11a1Q61245 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.47■■□□□ 1.35
Col11a1Q61245 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col11a1Q61245 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.47■■□□□ 1.35
Col11a1Q61245 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Col11a1Q61245 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC23.47■■□□□ 1.35
Col11a1Q61245 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.47■■□□□ 1.35
Col11a1Q61245 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.47■■□□□ 1.35
Col11a1Q61245 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col11a1Q61245 Gm12933-201ENSMUST00000120203 872 ntBASIC23.46■■□□□ 1.35
Col11a1Q61245 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col11a1Q61245 Gm42778-201ENSMUST00000199644 553 ntBASIC23.45■■□□□ 1.34
Col11a1Q61245 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col11a1Q61245 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col11a1Q61245 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col11a1Q61245 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col11a1Q61245 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.45■■□□□ 1.34
Col11a1Q61245 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Col11a1Q61245 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col11a1Q61245 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Col11a1Q61245 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Col11a1Q61245 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.43■■□□□ 1.34
Col11a1Q61245 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Col11a1Q61245 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Col11a1Q61245 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.43■■□□□ 1.34
Col11a1Q61245 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.43■■□□□ 1.34
Col11a1Q61245 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Col11a1Q61245 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Col11a1Q61245 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.42■■□□□ 1.34
Col11a1Q61245 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col11a1Q61245 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col11a1Q61245 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col11a1Q61245 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col11a1Q61245 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col11a1Q61245 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC23.41■■□□□ 1.34
Col11a1Q61245 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Col11a1Q61245 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col11a1Q61245 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Col11a1Q61245 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col11a1Q61245 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Col11a1Q61245 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Col11a1Q61245 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col11a1Q61245 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col11a1Q61245 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Col11a1Q61245 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col11a1Q61245 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.4■■□□□ 1.34
Col11a1Q61245 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Col11a1Q61245 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col11a1Q61245 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col11a1Q61245 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Col11a1Q61245 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Col11a1Q61245 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Col11a1Q61245 Nespas-201ENSMUST00000143738 1083 ntBASIC23.39■■□□□ 1.33
Col11a1Q61245 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col11a1Q61245 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col11a1Q61245 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Col11a1Q61245 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Col11a1Q61245 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Col11a1Q61245 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.38■■□□□ 1.33
Col11a1Q61245 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a1Q61245 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a1Q61245 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Col11a1Q61245 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a1Q61245 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a1Q61245 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a1Q61245 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.38■■□□□ 1.33
Col11a1Q61245 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a1Q61245 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms