Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Scnn1aQ61180 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.72■■□□□ 1.39
Scnn1aQ61180 Gm8493-201ENSMUST00000196881 489 ntBASIC23.72■■□□□ 1.39
Scnn1aQ61180 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scnn1aQ61180 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scnn1aQ61180 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Scnn1aQ61180 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scnn1aQ61180 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Scnn1aQ61180 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scnn1aQ61180 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scnn1aQ61180 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
Scnn1aQ61180 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.71■■□□□ 1.39
Scnn1aQ61180 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Scnn1aQ61180 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.71■■□□□ 1.39
Scnn1aQ61180 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.7■■□□□ 1.38
Scnn1aQ61180 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scnn1aQ61180 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.7■■□□□ 1.38
Scnn1aQ61180 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Scnn1aQ61180 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scnn1aQ61180 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Scnn1aQ61180 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.7■■□□□ 1.38
Scnn1aQ61180 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Scnn1aQ61180 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scnn1aQ61180 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.69■■□□□ 1.38
Scnn1aQ61180 Gm43017-201ENSMUST00000198296 752 ntBASIC23.69■■□□□ 1.38
Scnn1aQ61180 Gm43173-201ENSMUST00000202246 593 ntBASIC23.69■■□□□ 1.38
Scnn1aQ61180 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scnn1aQ61180 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scnn1aQ61180 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scnn1aQ61180 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scnn1aQ61180 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scnn1aQ61180 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Scnn1aQ61180 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scnn1aQ61180 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scnn1aQ61180 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Scnn1aQ61180 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.68■■□□□ 1.38
Scnn1aQ61180 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.68■■□□□ 1.38
Scnn1aQ61180 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scnn1aQ61180 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scnn1aQ61180 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Scnn1aQ61180 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scnn1aQ61180 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scnn1aQ61180 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scnn1aQ61180 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scnn1aQ61180 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scnn1aQ61180 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Scnn1aQ61180 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Scnn1aQ61180 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Scnn1aQ61180 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.66■■□□□ 1.38
Scnn1aQ61180 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scnn1aQ61180 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scnn1aQ61180 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scnn1aQ61180 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scnn1aQ61180 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.65■■□□□ 1.38
Scnn1aQ61180 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
Scnn1aQ61180 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scnn1aQ61180 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Scnn1aQ61180 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.65■■□□□ 1.38
Scnn1aQ61180 Spcs1-204ENSMUST00000226782 949 ntBASIC23.65■■□□□ 1.38
Scnn1aQ61180 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scnn1aQ61180 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Scnn1aQ61180 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scnn1aQ61180 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scnn1aQ61180 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.64■■□□□ 1.38
Scnn1aQ61180 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.64■■□□□ 1.38
Scnn1aQ61180 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.64■■□□□ 1.37
Scnn1aQ61180 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Scnn1aQ61180 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Scnn1aQ61180 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Scnn1aQ61180 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Scnn1aQ61180 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Scnn1aQ61180 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Scnn1aQ61180 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scnn1aQ61180 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Scnn1aQ61180 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.63■■□□□ 1.37
Scnn1aQ61180 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Scnn1aQ61180 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scnn1aQ61180 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Scnn1aQ61180 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scnn1aQ61180 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Scnn1aQ61180 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scnn1aQ61180 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scnn1aQ61180 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Scnn1aQ61180 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scnn1aQ61180 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scnn1aQ61180 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
Scnn1aQ61180 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scnn1aQ61180 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
Scnn1aQ61180 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scnn1aQ61180 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scnn1aQ61180 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scnn1aQ61180 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scnn1aQ61180 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scnn1aQ61180 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scnn1aQ61180 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scnn1aQ61180 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Scnn1aQ61180 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scnn1aQ61180 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Scnn1aQ61180 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.59■■□□□ 1.37
Scnn1aQ61180 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms