Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ptch1Q61115 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Ptch1Q61115 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ptch1Q61115 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Ptch1Q61115 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ptch1Q61115 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ptch1Q61115 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
Ptch1Q61115 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ptch1Q61115 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Ptch1Q61115 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Ptch1Q61115 Gm42778-201ENSMUST00000199644 553 ntBASIC30.25■■■□□ 2.43
Ptch1Q61115 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC30.25■■■□□ 2.43
Ptch1Q61115 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Ptch1Q61115 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Ptch1Q61115 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ptch1Q61115 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC30.24■■■□□ 2.43
Ptch1Q61115 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Ptch1Q61115 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC30.23■■■□□ 2.43
Ptch1Q61115 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ptch1Q61115 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Ptch1Q61115 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC30.23■■■□□ 2.43
Ptch1Q61115 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Ptch1Q61115 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
Ptch1Q61115 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC30.22■■■□□ 2.43
Ptch1Q61115 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ptch1Q61115 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
Ptch1Q61115 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ptch1Q61115 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ptch1Q61115 Nespas-201ENSMUST00000143738 1083 ntBASIC30.22■■■□□ 2.43
Ptch1Q61115 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ptch1Q61115 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ptch1Q61115 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Ptch1Q61115 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Ptch1Q61115 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Ptch1Q61115 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ptch1Q61115 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC30.2■■■□□ 2.42
Ptch1Q61115 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ptch1Q61115 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
Ptch1Q61115 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ptch1Q61115 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC30.19■■■□□ 2.42
Ptch1Q61115 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ptch1Q61115 Gm11421-201ENSMUST00000122124 294 ntBASIC30.19■■■□□ 2.42
Ptch1Q61115 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Ptch1Q61115 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Ptch1Q61115 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ptch1Q61115 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ptch1Q61115 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Ptch1Q61115 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ptch1Q61115 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ptch1Q61115 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ptch1Q61115 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ptch1Q61115 Gm10653-202ENSMUST00000139570 835 ntBASIC30.18■■■□□ 2.42
Ptch1Q61115 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ptch1Q61115 AC115037.1-201ENSMUST00000223391 2173 ntBASIC30.17■■■□□ 2.42
Ptch1Q61115 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Ptch1Q61115 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ptch1Q61115 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ptch1Q61115 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Ptch1Q61115 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Ptch1Q61115 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ptch1Q61115 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC30.16■■■□□ 2.42
Ptch1Q61115 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ptch1Q61115 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
Ptch1Q61115 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ptch1Q61115 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ptch1Q61115 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Ptch1Q61115 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Ptch1Q61115 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Ptch1Q61115 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ptch1Q61115 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC30.15■■■□□ 2.42
Ptch1Q61115 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ptch1Q61115 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC30.14■■■□□ 2.42
Ptch1Q61115 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ptch1Q61115 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ptch1Q61115 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ptch1Q61115 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
Ptch1Q61115 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ptch1Q61115 Gm44949-201ENSMUST00000206423 1450 ntBASIC30.13■■■□□ 2.41
Ptch1Q61115 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
Ptch1Q61115 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ptch1Q61115 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ptch1Q61115 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC30.13■■■□□ 2.41
Ptch1Q61115 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC30.12■■■□□ 2.41
Ptch1Q61115 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ptch1Q61115 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ptch1Q61115 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Ptch1Q61115 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Ptch1Q61115 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ptch1Q61115 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Ptch1Q61115 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ptch1Q61115 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Ptch1Q61115 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Ptch1Q61115 Gm27045-201ENSMUST00000182145 1402 ntBASIC30.1■■■□□ 2.41
Ptch1Q61115 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ptch1Q61115 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Ptch1Q61115 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
Ptch1Q61115 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ptch1Q61115 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ptch1Q61115 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ptch1Q61115 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms