Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.78■□□□□ 0.76
Trpc1Q61056 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trpc1Q61056 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trpc1Q61056 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trpc1Q61056 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trpc1Q61056 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trpc1Q61056 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trpc1Q61056 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trpc1Q61056 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Trpc1Q61056 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trpc1Q61056 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Trpc1Q61056 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trpc1Q61056 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.75
Trpc1Q61056 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trpc1Q61056 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trpc1Q61056 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trpc1Q61056 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trpc1Q61056 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trpc1Q61056 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trpc1Q61056 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trpc1Q61056 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trpc1Q61056 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trpc1Q61056 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.76■□□□□ 0.75
Trpc1Q61056 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.76■□□□□ 0.75
Trpc1Q61056 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trpc1Q61056 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trpc1Q61056 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trpc1Q61056 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.76■□□□□ 0.75
Trpc1Q61056 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trpc1Q61056 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trpc1Q61056 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trpc1Q61056 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trpc1Q61056 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trpc1Q61056 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trpc1Q61056 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trpc1Q61056 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.75■□□□□ 0.75
Trpc1Q61056 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trpc1Q61056 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trpc1Q61056 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trpc1Q61056 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trpc1Q61056 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trpc1Q61056 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trpc1Q61056 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trpc1Q61056 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trpc1Q61056 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trpc1Q61056 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trpc1Q61056 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trpc1Q61056 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpc1Q61056 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpc1Q61056 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpc1Q61056 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpc1Q61056 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpc1Q61056 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.73■□□□□ 0.75
Trpc1Q61056 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpc1Q61056 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpc1Q61056 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpc1Q61056 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trpc1Q61056 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trpc1Q61056 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpc1Q61056 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Trpc1Q61056 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trpc1Q61056 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.72■□□□□ 0.75
Trpc1Q61056 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpc1Q61056 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpc1Q61056 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trpc1Q61056 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpc1Q61056 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trpc1Q61056 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpc1Q61056 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trpc1Q61056 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpc1Q61056 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Trpc1Q61056 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trpc1Q61056 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpc1Q61056 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpc1Q61056 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trpc1Q61056 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.7■□□□□ 0.74
Trpc1Q61056 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trpc1Q61056 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpc1Q61056 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpc1Q61056 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.7■□□□□ 0.74
Trpc1Q61056 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.7■□□□□ 0.74
Trpc1Q61056 Gm5812-201ENSMUST00000061073 957 ntBASIC19.7■□□□□ 0.74
Trpc1Q61056 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trpc1Q61056 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpc1Q61056 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trpc1Q61056 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpc1Q61056 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trpc1Q61056 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpc1Q61056 Gm13238-201ENSMUST00000117655 780 ntBASIC19.69■□□□□ 0.74
Trpc1Q61056 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpc1Q61056 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpc1Q61056 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpc1Q61056 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpc1Q61056 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpc1Q61056 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpc1Q61056 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.69■□□□□ 0.74
Trpc1Q61056 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpc1Q61056 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Trpc1Q61056 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpc1Q61056 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms